The Donaghmoyne Network • Case Study Component

Chromosome 2 Triangulation Analysis

Segment-level evidence for the Donaghmoyne genetic network — methodology, validation, and the limits of what the evidence demonstrates
Reconstructed paternal kit · Three-platform convergence · Three sub-clusters identified · Algorithmically corroborated · Two named MRCAs · Segment-level four-couples confirmation

Author's Note on Methodology Disclosure

The DNA matches discussed on this page have been identified by the author through standard genetic-genealogy tools. For several matches, no detailed family tree was available from the tester directly, or the available tree was incomplete in the generations relevant to this research. In those cases, the author independently constructed the relevant pedigree using primary sources — Catholic parish records, civil registration, census returns, and emigration records — to evaluate whether the tester's documented ancestry connects to the Donaghmoyne ancestral population.

This is a methodologically significant point. When the page references a match's descent from a documented Monaghan or Louth family, that descent has been verified by the author from primary sources rather than accepted from the tester's self-reported tree. Pre-1800 ancestral attributions appearing in user-submitted online trees are noted separately as suggestive but not independently verified for this analysis. The distinction is preserved throughout the page.

Names of living individuals have been anonymized to first initials. Names of deceased ancestors documented in primary sources are given in full. Kit numbers have been retained where they appear in already-public-facing testing-platform contexts; redacted where they would identify a living individual not otherwise discussed.

1. The Problem This Analysis Addresses

Why conventional autosomal DNA methods could not resolve the Donaghmoyne paternal-line research question

The Donaghmoyne Network case study has long faced a structural limitation in its DNA evidence base. The Hamall direct line — Owen Hamall (1847–1898) → Thomas Henry Hamall (1880–1938) → Thomas Eugene Hamall (1904–1967) → the subject's father — narrowed in successive generations to single surviving children carrying the Hamall paternal inheritance forward. The subject's father, Thomas Kenny Hamall, died without testing his DNA. No paternal-line first, second, or third cousins exist. The five children of Thomas Kenny who have tested are siblings to one another and therefore share each other's DNA in ways that make sibling-only data structurally insufficient for paternal-line triangulation.

The implication for the Donaghmoyne research has been significant. Each of the four documented Donaghmoyne couples has been corroborated within its own descendant lines: the James Hamill & Ann Gartlan sibling group through Peter Hamill's 1949 death certificate and supporting DNA, the Owen Hammel & Ann King family through Wisconsin descendants, the Susan Hamill & Charles McCanna family through Joliet descendants. But the cross-line evidence — whether Henry Hamall, Owen Hammel, James Hamill of Dian, and Susan Hamill McCanna's father were brothers, first cousins, or more distantly related — has been carried by autosomal matches at threshold levels (typically 8–34 cM) that could be explained by either true descent from a common ancestor or by chance.

The December 2025 DNA Evidence Analysis page concluded that segment triangulation and Y-DNA testing would be the next steps required to strengthen the case beyond suggestive matching. This page reports the results of the segment-triangulation work that has since been completed, along with a methodological development that resolves the Chicago-line bottleneck without requiring Y-DNA: the construction and validation of a reconstructed paternal kit representing Thomas Kenny Hamall's paternal genome, built from his children's DNA using his wife's kit as a phasing reference.

The reconstructed kit makes possible the analytical step that was previously unavailable to this case study: each cluster match can now be tested directly against the subject's father's reconstructed paternal DNA, producing individually documented paternal-inheritance confirmation in addition to the cluster-level patterns previously available. The combination of mathematical triangulation across multiple platforms with reconstructed-kit one-to-one paternal verification produces segment evidence at the level of rigor sought by the December framework — and makes claims now possible that the earlier evidence base could not support.

2. Reconstructing Thomas Kenny Hamall

Methodology, validation, and the boundaries of what reconstruction accomplishes

2.1 The Reconstruction Workflow

The reconstructed paternal kit was produced through the Borland Genetics third-party reconstruction workflow, which builds a parent's genome from the DNA of multiple children and a co-parent. The conceptual basis is straightforward. Each child inherits exactly half of their DNA from each parent, and the inheritance patterns of full siblings overlap on roughly 50% of their genomes. By comparing each child's DNA against their mother's kit and identifying the segments that did not come from her, the algorithm extracts each child's paternal contribution. The four resulting paternal-only datasets are then merged into a single composite kit representing the deceased father's paternal genome.

For this analysis, the inputs were four of Thomas Kenny Hamall's five children — three 23andMe kits (the subject and two siblings, C. and K.) and one FTDNA kit (A., who was unable to provide saliva samples and therefore tested via FTDNA's cheek-swab protocol) — plus the maternal kit (the subject's mother, Barbara O'Brien Hamall). The fifth sibling, E., tested at Ancestry rather than 23andMe and was not used as input to the reconstruction; her role as independent validation is described in Section 2.2. The mother's kit functions as a phasing reference: any DNA in a child's kit that matches the mother's kit is excluded from the paternal extraction, leaving only the paternal contribution. The merged paternal dataset was uploaded to GEDmatch as a research kit, where it can be compared one-to-one against any other kit in the GEDmatch database.

One operational constraint of the resulting kit is significant for the methodology that follows. GEDmatch designates Borland-derived reconstructed kits as research kits, which restricts them to one-to-one comparisons. The standard one-to-many search that allows a tester to discover unknown matches is not available for research kits. Identifying candidate paternal matches therefore proceeds through indirect methods — running one-to-many searches on the subject's own kit and her siblings' kits, identifying matches that appear paternal-side based on shared-match patterns, and then running each candidate one-to-one against the reconstructed kit for confirmation.

What the reconstruction does — and does not — capture

Four-sibling reconstruction typically captures approximately 75–90% of a parent's paternal genome. The remaining 10–25% consists of paternal segments inherited only by children not contributing to the reconstruction. For Thomas Kenny Hamall, the absent fifth sibling (E.) carries some paternal DNA that none of the four contributors inherited, and that DNA is not represented in the reconstructed kit.

The practical implication for this analysis: matches sharing DNA with the subject's father exclusively in regions inherited only by E. will not be detectable through one-to-one comparison against the reconstructed kit. This is an honest limitation of the reconstruction approach, and any cluster-level finding stated on this page accounts for it.

2.2 Validation Methodology

The reconstructed kit's accuracy was validated by comparing it one-to-one against each of Thomas Kenny Hamall's five children. For a true parent-child comparison, GEDmatch's one-to-one tool returns characteristic statistics: a total Half-Identical Region (HIR) shared cM value of approximately 3,400–3,600 (each child shares roughly half a parent's genome), an estimated MRCA of one generation, near-complete coverage of the comparable SNPs, and a high full-identical-by-descent percentage indicating both alleles match on most compared positions. Any reconstruction that fails to produce these characteristics for known children is producing artifactual rather than accurate inheritance data.

Four of the five comparisons were against children whose kits contributed to the reconstruction itself — three from 23andMe and one from FTDNA. These comparisons confirm the algorithm successfully integrated each input — but because each contributing sibling's data is part of the reconstruction, their comparisons reflect both true paternal inheritance and reconstruction-input overlap. They are not, strictly speaking, independent tests of reconstruction accuracy.

The fifth comparison was against E., the subject's sister who tested at Ancestry rather than 23andMe and was not used in the reconstruction. Her kit was uploaded to GEDmatch from her Ancestry raw data file. Her comparison against the reconstructed kit is therefore structurally independent: her DNA is not part of the reconstruction's input, so any match between her kit and the reconstructed kit reflects genuine inheritance from the same biological father — not algorithmic overlap. This independent platform validation is the gold-standard test for reconstruction accuracy.

The reconstruction methodology therefore drew on three independent SNP-chip platforms across input and validation: 23andMe (three contributing siblings), FTDNA (one contributing sibling, A.), and Ancestry (E. as independent validation reference). Cross-platform input diversity strengthens reconstruction integrity by reducing dependence on any single platform's chip design.

2.3 Validation Results

Sibling Platform Total HIR (cM) HIR Coverage Largest Segment (cM) SNPs Used Full-IBD % Estimated MRCA
A. FTDNA (input) 3,585.0 99.92% 281.5 423,445 84.56% 1 generation
C. 23andMe (input) 3,454.1 96.27% 268.6 435,397 82.71% 1 generation
K. 23andMe (input) 3,146.6 87.70% 255.2 436,368 80.54% 1 generation
M.H.M. (subject) 23andMe (input) 3,082.1 85.90% 221.3 436,120 80.86% 1 generation
E. ★ Ancestry (independent) 2,500.8 69.71% 157.6 148,461 67.14% 1 generation

★ E. tested at Ancestry rather than 23andMe and was not used as input to the reconstruction. Her comparison provides structurally independent validation of reconstruction accuracy.

All five comparisons return the GEDmatch one-to-one tool's estimate of one generation to MRCA — confirming the reconstructed kit functions correctly as a parent-child comparator. The four contributing siblings show HIR coverage between 85.90% and 99.92%, with the variation reflecting each sibling's individual role in the reconstruction algorithm. A.'s near-perfect 99.92% coverage suggests her kit served as a primary phasing anchor; the others' coverage reflects fill-in contributions across the algorithm's processing.

E.'s comparison is the most analytically important result in the table. Her Ancestry kit was tested on a different SNP chip than the 23andMe kits used in the reconstruction, and the comparable SNPs between the two chips are limited — only 148,461 SNPs were available for the comparison versus 423,000–436,000 for the contributing siblings. Despite this reduced SNP density, E.'s comparison returned a Total HIR of 2,500.8 cM, a 1-generation MRCA estimate, and a full-IBD percentage of 67.14%. These values are consistent with a true parent-child relationship measured at lower SNP resolution. With the same SNP count available to her as her siblings had, her HIR would almost certainly land in the 90–95% range. The proportional pattern at the available SNPs already confirms the reconstruction produces accurate paternal inheritance data.

What the validation establishes

The reconstructed paternal kit accurately represents Thomas Kenny Hamall's paternal genome at sufficient fidelity to function as a one-to-one comparator. This is demonstrated through (1) five independent comparisons all returning correct parent-child match characteristics; (2) one of those comparisons being structurally independent of the reconstruction input data; and (3) full-identical-by-descent percentages consistent with low phasing-error rates across all comparisons.

The kit can be used as the basis for direct paternal-inheritance confirmation of any candidate paternal match. Each segment shared between an external match and the reconstructed kit constitutes documented evidence of paternal-side ancestry, distinct from inheritance through the maternal line.

2.4 The Decision to Retain E. as Independent Validation

The reconstructed kit could be improved in coverage by adding E.'s Ancestry kit as a fifth sibling input. Five-sibling reconstructions typically reach 90–95% paternal coverage versus the 75–90% range of four-sibling reconstructions. Adding E. would close some of the segment gaps, potentially surfacing additional paternal matches that the current reconstruction does not detect.

However, adding E. to the reconstruction would eliminate her function as the independent platform validation reference. Any subsequent comparison against the reconstructed kit would no longer have a structurally independent test point. For a research project that aspires to BCG portfolio standards and that may be evaluated by reviewers familiar with reconstruction methodology, the independent validation reference has substantial methodological value.

The decision documented for this analysis: E.'s kit is retained as the validation reference. She has not been added to the reconstruction. Should subsequent research identify a specific paternal coverage gap that her DNA could fill, this decision is reversible, but the marginal coverage improvement does not currently justify trading away the independent validation. This decision is recorded in the project's research log.

3. Cross-Platform Cluster Identification

How the chromosome 2 paternal cluster was identified independently across three platforms before any triangulation claim was made

Before any segment was painted or any triangulation claim was advanced, the chromosome 2 cluster was identified through four independent paths across three DNA-testing platforms. Cross-platform convergence on the same chromosomal region constitutes robust cluster identification: no single platform's algorithm or matching threshold determined the finding.

The first identification path used 23andMe's Cluster Relatives in Common feature with P.H. (the highest-cM cluster member at 38.5 cM with the subject) as the anchor. Selecting P.H. and requesting in-common-with matches surfaced a coherent grouping of paternal-side matches: S.M., M.R., B.R., T.S., D.O., J.L. and others. The 23andMe cluster did not name specific chromosomes, but the matches' segment data (visible on each match's individual page) consistently included shared chromosome 2 regions in the 35–60 megabase area.

The second identification path used GEDmatch's Compact Segment Mapper applied to the subject's top 15 matches. The visualization rendered each match's largest shared segments across all chromosomes simultaneously, and chromosome 2 stood out immediately as the densest stacking area. Eight to nine of the top fifteen matches had segments overlapping in roughly the same chromosome 2 region, with no comparable density on any other chromosome.

The third identification path used GEDmatch's "people who match both kits, or 1 of 2 kits" search applied to the subject's kit and P.H.'s kit. This surfaced individuals matching both — a list that overlapped substantially with the 23andMe cluster but added several GEDmatch-only matches (J.S., A.D., D.O.) not visible through 23andMe's tools.

The fourth identification path used MyHeritage's chromosome browser, which independently surfaced a chromosome 2 paternal cluster among the subject's MyHeritage matches. The MyHeritage cluster overlapped substantially with the GEDmatch and 23andMe clusters but added several MyHeritage-exclusive matches (A.W., A.C., A.B., R.S.) — particularly testers who had uploaded to MyHeritage from Ancestry and were therefore not visible through 23andMe.

The four identification paths converged on the same chromosomal region from different starting points and different match pools. This convergence is the strongest available pre-triangulation signal that the cluster represents genuine shared ancestry rather than algorithmic artifact.

4. Mathematical Triangulation Across Platforms

MyHeritage triangulation groups, 23andMe segment-level sub-clusters, and the cross-platform conservative core

Mathematical triangulation establishes that multiple matches share the same physical DNA segment with the kit owner and with each other simultaneously — a pattern explainable only by descent from at least one common ancestral source. This section presents the chromosome 2 triangulation evidence at three nested levels: MyHeritage's algorithmically-confirmed triangulation groups (TG1 and TG2), 23andMe's segment-level data revealing three separable sub-clusters, and the cross-platform conservative core where all three platforms converge on the same shared region.

4.1 MyHeritage Triangulation Group 1 (TG1)

MyHeritage's chromosome browser includes a triangulation tool that mathematically confirms when multiple selected matches share the same DNA segment with each other and with the kit owner simultaneously. Unlike one-to-one comparison, which only verifies bilateral sharing, triangulation establishes that all selected matches share the same physical DNA segment.

Chromosome2
Genomic position44,343,676 – 51,515,672
RSID rangers10495913 – rs2192982
Segment size9.4 cM
SNPs4,736
Triangulating matchesB.H., A.W., J.K., R.S., M.G., B.R. (six matches)

4.2 MyHeritage Triangulation Group 2 (TG2)

Chromosome2
Genomic position44,599,253 – 50,854,610
RSID rangers7593926 – rs79232266
Segment size8.9 cM
SNPs4,224
Triangulating matchesA.W., A.C., B.H., M.G., A.B., J.K., R.C. (seven matches)
MyHeritage triangulated segments visualization on chromosome 2

MyHeritage triangulation visualization showing the cluster of matches sharing overlapping segments on chromosome 2. Each colored bar represents one match's segment; the highlighted central region indicates the minimum shared region across all selected matches.

TG2's coordinates are nested within TG1's — TG2 (44,599,253 – 50,854,610) sits inside TG1 (44,343,676 – 51,515,672). This is the expected behavior when MyHeritage's algorithm computes the minimum shared region across different match subsets. TG2 represents the conservative core: the smallest segment that all seven of its members definitively share. TG1 represents the broader region shared by its six members. Both groups identify the same underlying ancestral segment.

Combining the membership of both groups yields nine unique MyHeritage matches confirmed mathematically triangulating on chromosome 2: B.H., A.W., J.K., R.S., M.G., B.R., A.C., A.B., R.C. Four matches (B.H., A.W., M.G., J.K.) appear in both groups, providing the strongest individual-match triangulation confirmation.

4.3 23andMe Segment-Level Sub-Cluster Identification

Chromosome 2 Donaghmoyne paternal cluster — segment painting Stacked bar visualization of 26 cluster matches' chromosome 2 segments with the subject's father, color-coded by sub-cluster: warm brown for Cluster A (deeper Hamill origin), gold for Cluster B (Trainor/Louth), forest green for Cluster C (Donaghmoyne paternal core). Three bars in identical-boundary sub-cluster outlined in red. Chromosome 2 — paternal segment painting (26 cluster matches) Bars show captured segment coordinates from 23andMe; identical-boundary trio (J.C., G.W., B.U.) outlined 0 Mb 25 Mb 50 Mb 75 Mb 100 Mb 125 Mb R.vE. T.S. H.R. L.H. J.D.E. K.McE. D.M. J.R. C.F. D.E. F.R. P.H. B.U. J.McG. J.C. G.W. M.K. B.R. K.W. N.L. G.Wo. J.Su. C.A. M.D.S. J.D.E.² K.McE.² Cluster A — deeper Hamill origin Cluster B — Trainor/Louth-side Cluster C — Donaghmoyne paternal core Identical-boundary sub-cluster (J.C., G.W., B.U.) — Peter McGeough MRCA

Stacked segment painting of the chromosome 2 paternal cluster, showing all twenty-six matches with captured segment coordinates. Bars are positioned by their actual GRCh37 base-pair coordinates (0–145 Mb shown). Color encodes sub-cluster: warm brown = Cluster A deeper Hamill origin; gold = Cluster B Trainor/Louth-side; forest green = Cluster C Donaghmoyne paternal core. Red dashed brackets mark the identical-boundary sub-cluster (B.U., J.C., G.W. — all at 36,862,239 – 59,041,432 to the SNP, descended from Peter McGeough 1788–1869, see Worked Example 4). J.McG. shares the same start position as the trio but ends earlier (52.88 Mb vs 59.04 Mb), so is not part of the identical-boundary group despite visual proximity. The two far-right segments (J.D.E.² and K.McE.²) are second segments from the same matches, representing additional ancestral signals separated from the main cluster region. Two segments from one excluded cluster member are not shown in this visualization.

The MyHeritage triangulation work in 4.1 and 4.2 demonstrated mathematical confirmation of nine matches sharing a chromosome 2 segment. Adding 23andMe segment-level data to the analysis reveals that the chromosome 2 paternal contribution is more analytically structured than the MyHeritage core alone suggests. Twenty-three 23andMe matches with captured chromosome 2 segment coordinates resolve into three separable sub-clusters, occupying overlapping but distinct regions of chromosome 2. Each sub-cluster carries a different surname signature, and each appears to represent a genealogically distinct ancestral contribution.

Sub-cluster Cluster A — the deeper Hamill origin. Three matches share segments beginning at approximately 30.3–30.5 megabases — earlier on the chromosome than any Cluster B or C match. T.S. (24.50 cM, 30,526,780 – 51,604,274) and R.vE. (27.40 cM, 30,319,618 – 52,338,106) triangulate at approximately 21 megabases of shared segment. N.L. shares a smaller segment overlapping the cluster's right edge (11.20 cM, 43,121,284 – 51,514,659). T.S.'s line traces through documented County Monaghan Hamill ancestry (Worked Example 1, Section 7); R.vE. and N.L. both descend from Owen Hammel and Nancy King of the Wisconsin Hammel branch — a separate emigrant family explicitly distinct from the subject's own Owen Hamall (1847–1898) line. The earlier segment start position and the Hamill-only surname signature suggest this cluster represents a deeper Hamill origin pre-dating the divergence of the subject's Donaghmoyne paternal Hamill family from the Wisconsin emigrant Hammel family.

Sub-cluster Cluster B — Trainor, Macaslin, and the Louth-side maternal/spousal network. Seven matches cluster between approximately 35.7 and 85.4 megabases, with a Trainor-Macaslin core extending rightward beyond the Cluster C endpoint. The largest segment in this cluster (49.32 cM) belongs to F.R., the father of B.R. (Worked Example 2 in the December 2025 page). Other Cluster B members include K.W., G.Wo. (a documented second cousin of K.W.), M.D.S., J.Su., C.A., M.K., and H.R. The surname signature concentrates in Trainor, Macaslin, Gartlan, Thornton, McArdle, McParland, Killough, Shevlin, and McGurk — surnames concentrated in the Louth–Monaghan border region (Carrickmacross, Inniskeen, extending into Termonfeckin and Dundalk in County Louth). Cluster B appears to represent collateral marriages of the Donaghmoyne Hamill/Hammel paternal line into Louth-side spousal families rather than the paternal Hamill line itself.

Sub-cluster Cluster C — the Donaghmoyne paternal endogamous core. Ten matches cluster between approximately 36.07 and 75.55 megabases, with a densest overlap zone at 36,862,239 – 52,883,758 (approximately 16 megabases shared by all Cluster C members). This cluster contains P.H. (Worked Example 3) along with J.R., C.F., D.E., D.M., J.McG., J.C., G.W., B.U., and (with shorter segments) K.McE., L.H., and J.D.E. The surname signature is the densely interconnected McEneaney / McGeough / Hoey / Woods / Rooney / McGurk / Marron / Hanratty / Finegan / Crosby / McMahon network of the Donaghmoyne and Inniskeen Catholic parishes. Cluster C is the Donaghmoyne paternal endogamous core — the cluster within which MyHeritage TG1 and TG2 sit (see Section 4.4).

Within Cluster C, an identical-boundary sub-cluster. Three Cluster C matches — J.C., G.W., and B.U. — share segments with the subject that are identical to the SNP. All three boundaries are 36,862,239 – 59,041,432, all three at 21.09 cM and 4,682 SNPs. Identical-SNP boundaries across three independent matches are not the typical signature of distant cousin matches, where individual segments overlap but boundaries vary. Identical boundaries indicate either a tight recombination hotspot at those exact coordinates or descent from a shared ancestor through paths recent enough that the segment hasn't recombined further. Tree analysis of all three matches resolves the ambiguity: all three converge on Peter McGeough (1788–1869) of the Donaghmoyne McGeough core (see Worked Example 4, Section 7).

Methodological note on the three-cluster structure

Cluster A, B, and C are not separate triangulation groups in the MyHeritage sense — they are 23andMe-segment-level groupings identified by segment-position overlap and surname signature analysis. Each cluster represents a distinct ancestral contribution to chromosome 2, but the boundary between B and C overlaps and some matches sit at the boundary depending on which dimension of analysis (segment position, surname pattern, shared-match clustering) is privileged.

The three-cluster structure was originally descriptive rather than mechanistic — reflecting an observable pattern in the segment data. Section 4.5 below shows that 23andMe's machine-learning DNA Relatives Clustering algorithm independently produced the same three-cluster grouping using shared-DNA patterns rather than segment-position information, providing algorithmic corroboration of the structure. The most rigorous evidence for shared ancestry remains the MyHeritage mathematical triangulation in TG1 and TG2 plus the GEDmatch one-to-one paternal confirmations in Section 5; the 23andMe sub-clusters add resolution to the population-level finding by separating distinct ancestral signals on the same chromosome.

4.4 Cross-Platform Convergence: The Conservative Core

Aligning the segment coordinates from all three platforms reveals that the 23andMe Cluster C conservative intersect (36,862,239 – 52,883,758) fully contains both MyHeritage triangulation groups: TG1 (44,343,676 – 51,515,672) and TG2 (44,599,253 – 50,854,610). Three independent platforms — 23andMe segment matching, MyHeritage's mathematical triangulation algorithm, and GEDmatch one-to-one comparison against the subject's father's reconstructed paternal kit (Section 5) — independently detect the same chromosome 2 paternal Donaghmoyne segment.

The smallest region confirmed by all three platforms simultaneously is the segment at 44,599,253 – 50,854,610: 6.25 megabases, MyHeritage TG2's coordinates. This is the conservative cross-platform-confirmed core. Every match populating this region is detected as a triangulation member by MyHeritage's algorithm, falls within the 23andMe Cluster C boundary, and (for those matches accessible on GEDmatch) returns a confirmed paternal segment when compared one-to-one against the reconstructed kit.

The Cross-Platform Conservative Core

The chromosome 2 segment at 44,599,253 – 50,854,610 (6.25 Mb, GRCh37/hg19) is independently detected as part of the Donaghmoyne paternal cluster by:

(1) 23andMe segment-level matching across multiple Cluster C matches; (2) MyHeritage Triangulation Group 2's algorithmic confirmation of seven matches sharing the segment with the subject and with each other simultaneously; (3) GEDmatch one-to-one comparison of multiple Cluster C matches against the subject's father's reconstructed paternal kit (Section 5).

This convergence is the strongest single evidentiary finding in the chromosome 2 analysis. No platform-specific algorithmic artifact could produce the same segment-position result across three independently engineered matching systems. The 6.25 megabase conservative core is documented, multi-platform-confirmed paternal-side shared ancestry between the subject and a Donaghmoyne genetic cluster.

4.5 23andMe Algorithmic Corroboration of the Three-Cluster Structure

The three-cluster structure described in Section 4.3 was identified by manually comparing 23andMe-captured segment coordinates and surname signatures across the cluster's 23andMe matches. An independent line of evidence for the same three-cluster structure comes from 23andMe's DNA Relatives Clustering tool — a machine-learning system that groups a tester's matches into clusters based on patterns of shared DNA among them, without using segment-position information.

Running the clustering tool with D.E. (one of the central Cluster C matches in the segment-level analysis) as the "Relative in Common" anchor produced twelve clusters. The three largest clusters correspond directly to the three sub-clusters identified by segment analysis. Cluster 1 (twenty-five members) contains the main Donaghmoyne paternal core: P.H., G.W., D.E. herself, J.C., B.U., J.R., C.F., D.M., F.R., H.R., and thirteen additional matches not previously captured in the segment-level analysis (designated C.D., J.H., J.M., C.F.2, A.J., J.D., M.F., J.K., A.C., L.Ga., A.S., L.G., and A.Sm. — all anonymized to initials pending tree investigation). This cluster corresponds to Cluster C from Section 4.3. Cluster 2 (four members) contains R.vE., R.C., L.Lo., and T.S. — corresponding precisely to Cluster A, the deeper Hamill origin. Cluster 3 (three members) contains B.R., G.Wo., and K.W. — corresponding to Cluster B, the Trainor/Louth-side network.

The remaining nine clusters in the D.E. clustering view contain singletons or small two-to-three person groupings (J.D.E. + K.McE., M.K., a Schmitz/Freis pair, an Arteau/Gerlach/Serge triplet, and individual singletons). The Schmitz/Freis and Arteau/Gerlach groupings carry German and French-Canadian surname patterns that suggest they represent D.E.'s ancestral lines unrelated to the Donaghmoyne paternal core; investigating whether they appear in the subject's own clustering view (rather than D.E.'s) would confirm or refute that interpretation.

Independent algorithmic corroboration

The three-cluster structure on chromosome 2 is now supported by two independent methodological lines: segment-position analysis using captured 23andMe and MyHeritage segment coordinates plus GEDmatch one-to-one comparisons, and 23andMe's machine-learning DNA Relatives Clustering algorithm operating on shared-DNA patterns without using segment-position information. The two methods converged on the same three-cluster grouping, with cluster membership corresponding precisely between them.

This convergence has implications beyond confirming the three-cluster hypothesis. The new Cluster 1 members surfaced by 23andMe clustering — thirteen matches not previously visible through segment-level capture — represent additional Donaghmoyne paternal cluster members at population-level confirmation. Each is grouped by 23andMe's algorithm with the same matches that segment evidence has confirmed as Donaghmoyne paternal-line. Tree investigation for each new member is flagged as a research lead in Section 10. Each successful tree resolution that documents Donaghmoyne descent strengthens the surname-signature evidence layer; each that resolves to non-Donaghmoyne descent will be informative about the cluster's edge cases and the limits of cluster membership as evidence.

Note on D.E.'s placement specifically: D.E. is anchored at the center of Cluster 1 alongside the Peter McGeough identical-boundary trio (J.C., G.W., B.U.). This algorithmic placement provides corroborating evidence for the observation in Section 5.2 that D.E.'s near-identical Chr 2 segment boundaries with P.H. (P.H. at 36,069,858–72,096,992; D.E. at 36,096,465–72,308,674) likely reflect close-kinship structural sharing within the cluster. Because D.E. is not on GEDmatch, reciprocal one-to-one comparison with P.H. cannot be run; the 23andMe clustering algorithm's grouping of D.E. with P.H. and with the Peter McGeough trio is the available alternative form of evidence.

A subsequent analytical update extends this algorithmic corroboration across five additional clustering snapshots, each anchored on a different focal match within the cluster's match population. The five anchoring views capture: a T.S. focal context (47 matches resolving into 9 clusters); an L.F. anchor (a focused 7-match view that isolates the Wisconsin Hammel sub-cluster as Cluster 1 with R.C. + R.vE. + L.Lo. + L.F. co-occurring as expected); a J.H. focal context (43 matches, 9 clusters); a K.McE. focal context (38 matches, 11 clusters); and an F.R. focal context (50 matches, 11 clusters).

Across all five anchoring views, three sub-cluster patterns consistently emerge with cluster membership corresponding to the structural Cluster A/B/C distinctions identified by segment-position analysis. The Wisconsin Hammel sub-cluster (R.C. + R.vE. + L.Lo. + T.S., with L.F. surfacing in the L.F.-anchored view) maps consistently to Cluster A across the snapshots. A Trainor-adjacent sub-cluster — B.R. + K.W. + C.A. + J.Su. — maps to Cluster B in the J.H., K.McE., and F.R. anchored views. The McEntegart–Holzman sub-cluster (K.McE. + L.H., with J.D.E. surfacing in some snapshots and R.C. surfacing in the K.McE.-anchored view) intersects Cluster C's boundary with the smaller sub-cluster groupings.

One observation worth flagging from the multi-anchor data: R.C. appears in the Wisconsin Hammel sub-cluster in the T.S. and L.F. anchored views and in the McEntegart–Holzman sub-cluster in the K.McE.-anchored view. This cross-cluster appearance pattern is consistent with R.C.'s documented descent (via his first cousin T.S.) from a Hamill paternal line that places him kin to multiple cluster sub-groups simultaneously — the Andrew Hamill (1793–1866) chain through James Anthony Hamill (1818 Monaghan) and his son's wife Catharine Hamill Webb. T.S. and R.C.'s documented Hamill chain was extended in subsequent research-log work back through Anthony Hamill (1750–1820) m. Margaret Hood Hamill (1756–1824) to John J Hamill m. Annis Lettice Dinsmore. The deeper Anthony + Margaret Hood couple is independently corroborated by parallel descent in another DNA-tested line (a separate cousin researcher's tree converging on the same Anthony Hamill couple), strengthening the case for this being a documented common ancestor rather than a tree-attestation artifact.

Multi-anchor algorithmic confirmation

Five independent 23andMe clustering snapshots, each anchored on a different focal match within the same underlying match population, produce consistent three-sub-cluster decompositions. The Wisconsin Hammel sub-cluster, the Trainor-adjacent sub-cluster, and the McEntegart–Holzman sub-cluster emerge across all five anchoring views with cluster membership corresponding to the structural cluster identifications established by segment-position analysis. The consistency of cluster-membership across different anchor matches is the strongest available evidence that the three-cluster structure is a real ancestral signature rather than an artifact of anchor choice or algorithmic threshold.

Combined with the original D.E.-anchored snapshot above, six total anchored views of the same match population have now produced consistent three-cluster decompositions. The chromosome 2 sub-cluster structure is corroborated by segment-position analysis (Section 4.3), 23andMe machine-learning clustering (Section 4.5), and now multi-anchor algorithmic robustness — three independent methodological lines converging on the same finding.

5. Direct Paternal-Line Confirmation

One-to-one comparison of cluster matches against the reconstructed paternal kit

Mathematical triangulation establishes that multiple matches share the same chromosomal segment, but it does not establish whether that shared segment was inherited through the paternal or maternal line. For the Donaghmoyne research question, the distinction is essential: a segment shared through the maternal O'Brien-Robertson line would not bear on the Hamall paternal-line hypothesis at all.

The reconstructed paternal kit allows direct paternal-line confirmation. For any match in the chromosome 2 cluster, a one-to-one comparison against the reconstructed kit returns a definitive result: a confirmed paternal segment, no significant shared cM (indicating a maternal-line connection), or a coverage gap (the shared region falls in a part of the paternal genome not captured by the reconstruction).

One operational note constrains the workflow. GEDmatch is currently the only platform supporting one-to-one comparisons against research kits. The reconstructed kit cannot be tested against MyHeritage-only matches (A.W., A.C., A.B., R.S., R.C.) because those matches' raw DNA has not been uploaded to GEDmatch. Their triangulation through MyHeritage's mathematical tool stands as confirmed shared segment evidence, but their paternal inheritance cannot be independently verified through the reconstructed kit. The same caveat applies to many of the 23andMe-only matches in Section 4.3 whose kits have not been transferred to GEDmatch (Section 5.3 lists these as a separate evidence layer). For the matches available on GEDmatch, the one-to-one results below constitute the most rigorous form of paternal-inheritance documentation currently available for this case study.

5.1 One-to-One Paternal Confirmation Results

Match GEDmatch Kit Source Platform M.H.M. ↔ Match (cM) Paternal Status vs Reconstructed Kit Documented Family Connection
M.S. ★ A101561 GEDmatch (Ancestry-derived) 21.8 Confirmed paternal — Chr 4 segment 38,728,076–64,474,350 (largest Chr 4 paternal segment in cluster) ★ Susan Hamill (1835–1917) + Charles McCanna (1816–1897) — one of the four documented Donaghmoyne couples; via great-grandmother E McCanna Sheridan (1868–1937)
P.H. DW2855383 23andMe 38.5 Confirmed paternal — three segments: Chr 2 at 36,069,858–72,096,992 (35.8 cM, main Cluster C); Chr 4 at 67,525,255–75,738,235 (7.2 cM, late Chr 4); Chr 16 at 84,412,028–86,149,757 (7.3 cM) Hoey of Termonfeckin (Louth) + McEneaney of Donaghmoyne via Mary McEneaney Hoey (1841–1900)
B.R. SV2193713 MyHeritage 43.9 Confirmed paternal — reconstructed kit ↔ B.R. returns 29.6 cM (Chr 2, MRCA 4.5 generations, definitively-paternal portion); subject's own kit ↔ B.R. returns 43.9 cM total paternal sharing (MRCA 4.2 generations). 67% sensitivity / 100% specificity tradeoff — see Worked Example 6 for full treatment Earliest documented Trainor ancestor: Thomas Trainor (b. c.1833 Athlone, Ireland; father Owen Trainor; mother Mary J. Macaslin) per 1880 Clay County Illinois marriage record. Three-generation × four-platform cluster line documented through S.T.R. / F.R. / B.R. (Worked Example 6). Geographic mechanism connecting this line to the Donaghmoyne network is open documentary research
D.O. QA7465421 GEDmatch 26.8 Confirmed paternal — Chr 2 cluster region Clarke + Finnegan via Terrance T. Clarke (Carrickmacross) and Sarah Finnegan
T.S. CF4528844 23andMe 24.6 Confirmed paternal — Chr 2 cluster region (Cluster A position) Hamill of Monaghan via Andrew Hamill (1793–1866) and James Anthony Hamill (1818 Monaghan – 1900 Liverpool)
S.M. FX4755577 23andMe 21.7 Confirmed paternal — Chr 2 cluster region McGeough via Mohan; Michael McGeough (1806–1881) + Ann Woods McGeough
M.R. MZ1835330 23andMe 21.7 Confirmed paternal — Chr 2 cluster region McGeough via Mohan (first-cousin range to S.M.; same branch)
J.L. T712451 23andMe 21.6 Confirmed paternal — Chr 2 cluster region Patrick Gartlan (1843–1920) + M. Finnegan Gartlan via McVerry maternal line
A.D. AK5599003 GEDmatch 12.9 Confirmed paternal — Chr 2 cluster region Pedigree investigation in progress
J.S. A574390 GEDmatch Confirmed paternal — Chr 2 cluster region McCabe of Magheracloon parish, County Monaghan via Bridget McCabe Graham (1874–1959)

★ Featured match: M.S. is a documented descendant of Susan Hamill (1835–1917), one of the four documented Donaghmoyne couples — providing segment-level confirmation linking the chromosome 4 paternal evidence directly to a documented Donaghmoyne family head. Discussed in detail in Worked Example 5. An additional cluster match (E.R.Q.) returns a 7.3 cM threshold-level paternal segment on chromosome 20 (58,118,612–59,689,300) but descends through a documented Tyrone Hamill line distinct from the Monaghan Donaghmoyne paternal core; her connection is treated as deeper Ulster Hamill kinship rather than direct four-couples descent. Two additional cluster matches (J.T.Y. and M.B.) appearing in the GEDmatch matrix on chromosome 2 are not yet included pending pedigree investigation.

Donaghmoyne triangulation group — chromosome 2 nine-match cluster DNA Painter triangulation group view showing 9 matches sharing chromosome 2 segments with the subject's father, with conservative core at 44.3-52.0 Mb (9.8 cM) highlighted in red. P.H. additional confirmed paternal segments on chromosomes 4 and 16 shown in separate tracks below. Donaghmoyne triangulation group — 9 matches on chromosome 2 Plus P.H. additional confirmed paternal segments on chromosomes 4 and 16 DNA Painter group: "Chromosome 2 Donaghmoyne TG (9.8 cM core, 44.3M–52.0M)" Chr 2 9.8 cM conservative core P.H. 35.8 cM M.R. 21.7 cM S.M. 21.7 cM B.R. 43.9 cM T.S. 24.6 cM D.O. 26.8 cM J.L. 21.6 cM J.S. A.T.D. TBD 0 25 50 75 100 125 150 175 200 225 Mb Chr 4 P.H. — 7.2 cM 0 25 50 75 100 125 150 175 Mb Chr 16 P.H. — 7.3 cM 0 25 50 75 Mb Cluster C — Donaghmoyne paternal core Cluster B — Trainor/Louth (B.R.) Cluster A — deeper Hamill (T.S.)

DNA Painter triangulation group view independently corroborating the chromosome 2 cluster finding. Nine matches share segments across the conservative core at 44.3M–52.0M (9.8 cM, highlighted in red dashed brackets). The conservative core in this DNA Painter group corresponds closely to the cross-platform conservative core identified in Section 4.4 (44,599,253–50,854,610, 6.25 Mb confirmed by 23andMe, MyHeritage, and GEDmatch independently) — a fourth platform's algorithmic confirmation. P.H.'s additional confirmed paternal segments on chromosomes 4 and 16 shown below. Bar colors reflect each match's primary cluster membership: B.R. shown in Cluster B gold (her segment also extends into Cluster B Trainor/Louth-side territory beyond the conservative core); T.S. in Cluster A warm brown (her segment also extends into Cluster A's earlier-start deeper Hamill region). All other bars in Cluster C forest green.

DNA Painter chromosome map showing painted paternal segments on Thomas Kenny Hamall's reconstructed kit profile

Painted chromosome 2 segments on the reconstructed paternal kit profile. Each colored bar represents an individual match's confirmed paternal segment, demonstrating the cluster of independent matches on the same chromosome region. Match names anonymized.

5.2 The P.H. Multi-Chromosome Finding

P.H.'s comparison against the reconstructed kit returned three confirmed paternal segments — the chromosome 2 main cluster region, plus two additional segments on chromosome 4 (7.2 cM) and chromosome 16 (7.3 cM). The two additional segments are above the standard 7 cM IBD reliability threshold but at its lower bound, and they are flagged accordingly in the project's research log.

Multi-chromosome paternal sharing is significant for two reasons. First, it indicates that P.H.'s total shared cM with Thomas Kenny Hamall (across all three segments) is meaningfully higher than P.H.'s 38.5 cM total shared cM with the subject. The combined evidence is consistent with a 3rd-cousin to 3C1R relationship range — closer than the typical 4th-cousin range that single-cluster-segment matches tend to occupy. Second, multi-chromosome sharing supports a closer MRCA estimate. A single shared segment can survive recombination across many generations; multiple independent segments are more likely to indicate fewer generational distances. The combined evidence places P.H.'s most recent common ancestor with the subject's father in the 1820s–1850s Donaghmoyne generations, consistent with the documented timeframe of the four-couple Donaghmoyne network.

5.3 Additional 23andMe Segment-Confirmed Matches

Beyond the matches in the Section 5.1 table, an additional set of 23andMe matches has captured chromosome 2 segment data placing them within the cluster, but their kits have not been transferred to GEDmatch and therefore cannot be tested one-to-one against the reconstructed paternal kit. Their evidentiary status sits at MyHeritage Tier 1 (mathematical triangulation across multiple platforms when their segments are also detected by MyHeritage) plus 23andMe segment-level cluster confirmation, but not at the reconstructed-kit Tier 2 of Section 5.1. The table below documents these matches with their captured segment coordinates and surname signatures.

Match Cluster Chr 2 Start (bp) Chr 2 End (bp) cM Documented Family Connection
R.vE. A 30,319,618 52,338,106 27.40 Owen Hammel + Nancy King (Wisconsin Hammel branch — distinct from Owen Hamall Chicago line)
N.L. A 43,121,284 51,514,659 11.20 Owen Hammel + Nancy King (Wisconsin Hammel branch)
F.R. B 36,179,192 80,590,889 49.32 Trainor line — earliest documented ancestor Thomas Trainor (b. c.1833 Athlone Ireland; parents Owen Trainor + Mary J. Macaslin) per 1880 Clay County IL marriage record; father of B.R. (Section 5.1)
H.R. B 35,732,687 60,785,937 24.30 Trainor + Macaslin (close kin to F.R. and B.R.; segment at low SNP density — quality flagged)
K.W. B 42,985,803 79,310,943 38.97 Clark + McArdle + McParland (Louth-side surname signature)
G.Wo. B 43,127,717 85,447,830 44.10 Documented second cousin of K.W.; same Clark/McArdle/McParland Louth line
M.D.S. B 45,868,365 66,817,428 18.34 McGough + McGurk + Shevlin (Louth-side)
J.Su. B 45,253,578 66,944,047 19.83 Callan + Gartlan (close-kin to C.A.; segment at low SNP density — quality flagged)
C.A. B 45,321,272 66,817,428 19.48 Callan + Gartlan (close-kin to J.Su.)
M.K. B 36,941,347 52,064,616 16.75 Gartlan + Thornton + Louth surname signature
J.R. C 36,066,680 65,234,580 27.24 McEneaney + Rooney + McGurk Donaghmoyne network
C.F. C 36,066,680 66,196,670 28.60 Finegan + Crosby + Clark + McMahon
D.E. C 36,096,465 72,308,674 39.23 Finegan + Crosby + Clark + McMahon (same surname signature as C.F.)
D.M. C 36,066,680 66,817,428 29.70 Marron + Hanratty Donaghmoyne surnames
J.McG. C 36,862,239 52,883,758 17.73 McGeough + Woods + McEneaney + Hoey (McGeough-Woods sub-cluster)
J.C. ◆ C 36,862,239 59,041,432 21.09 McGeough + Woods + McEneaney + Hoey via O McGoff McGeough (1888–1958) → Peter McGeough (1788–1869)
G.W. ◆ C 36,862,239 59,041,432 21.09 McGeough + Woods via V McGough Wetten (1907–2001) → Henry McGeough (1807–1872) → Peter McGeough (1788–1869)
B.U. ◆ C 36,862,239 59,041,432 21.09 1C1R to G.W. via V McGough Wetten (1907–2001); same descent path to Peter McGeough (1788–1869)
K.McE. C 36,066,680 46,192,092 12.25 McMahon + Quigley + McEntegart (also second Chr 2 segment 99,529,858 – 111,996,750 at 9.85 cM — separate ancestral signal)
L.H. C 36,066,680 46,490,548 13.00 McGinn + Smith — Monaghan-to-Quebec migration line
J.D.E. C 36,066,680 47,121,858 14.00 Casey + Duffy + Connolly + Callaghan (also second Chr 2 segment 65,232,229 – 74,446,012 at 10.90 cM)

◆ = Member of the identical-boundary sub-cluster (Worked Example 4). All three matches share segments at 36,862,239 – 59,041,432 identical to the SNP, indicating descent from a recent common ancestor (Peter McGeough, 1788–1869) through paths recent enough that the segment has not yet recombined.

What direct paternal confirmation establishes — combined with the broader 23andMe segment evidence

The matches in the Section 5.1 table share documented paternal segments with the subject's father — confirmed individually by one-to-one comparison against the reconstructed kit. The matches collectively span at least nine independent family lines descending from documented Monaghan or Louth ancestors, all converging on chromosome 2 paternal segments overlapping the cluster region.

Combined with the MyHeritage triangulation evidence in Section 4.1–4.2, the 23andMe segment-level sub-cluster identification in Section 4.3, the cross-platform conservative core in Section 4.4, and the additional 23andMe segment-confirmed matches in Section 5.3, the chromosome 2 cluster is now documented at five layered evidence levels: (1) cross-platform identification through multiple independent search paths; (2) mathematical triangulation confirming nine matches share the same minimum segment on MyHeritage; (3) 23andMe segment-level resolution into three distinct sub-clusters with one named MRCA; (4) cross-platform convergence on a 6.25 megabase conservative core confirmed by all three platforms; (5) direct paternal-inheritance confirmation against the subject's father's reconstructed genome for at least nine GEDmatch-accessible matches.

6. The Surname Signature

Recurring surname patterns across the cluster — population-level evidence for an endogamous Donaghmoyne community

Beyond the segment-level evidence on chromosome 2, the cluster's matches share a distinct surname signature in their documented ancestry. Cross-tabulating the documented family connections of all cluster matches yields a recurring set of surnames concentrated geographically in southeast County Monaghan and adjacent County Louth. The surname pattern is independent corroboration of the segment evidence: it is not derived from the DNA itself but from primary-source documentation of each match's ancestral lineage, and it concentrates in a specific micro-region that would not be expected if the cluster represented broader Irish or general European ancestry.

Rank Surname Independent Matches Geographic Origin Notes
1Hamill / Hamel / Hammill8+ in cluster (3+ outside)Donaghmoyne; Drumaconvern (M.B. line); James Anthony Hamill 1818 Monaghan documented; Wisconsin Hammel branch separateMultiple branches in cluster across Cluster A and C, plus M.S. (Susan Hamill McCanna line — Worked Example 5) and parallel Chr 4 finding via M.B. (Section 5.2). Documented Monaghan-area Hamill families now identified at four locations: subject's Henry Hamall line; Andrew Hamill (1793) line via T.S.; Mary Hamill (1800) Trainor-Hamill Michigan branch; Sylvester Hamill of Drumaconvern townland (Farney Barony) via M.B. The Hamill surname is necessary but not sufficient for cluster membership: at least three documented Hamill-surnamed matches (Steven Hammill with deep tree to "James Hamell I"; G.G.B.H. via Samuel Hamill 1796; Brian S Hamill via Hercules Hamill 1795) do NOT share segments with the subject's father at 7 cM threshold and represent distinct Plantation-era or Tyrone Hamill paternal lineages outside the Donaghmoyne Catholic cluster. Deep tree convergence on James Hamell I (1652–) appears in user trees but is not independently documented; appearance in non-cluster trees suggests the attribution is community-shared family lore rather than primary-source documentation.
2McGeough / McGough / McGue5+Donaghmoyne — Peter McGeough (1788–1869) documented MRCAPeter McGeough confirmed as MRCA for identical-boundary sub-cluster (Worked Example 4). Variant spellings include McGue (Anglicized form). Hypothesized brother P. McGue McGeough (1800) ties Trainor-Hamill Michigan branch into Donaghmoyne core (Section 10).
3Gartlan / Gartland5+Donaghmoyne / MonaghanFour to five independent branches: Hugh + Kerley Kirley (two trees); Patrick P + McEvoy; Daniel + Anne Duffy; Mary Gartlan Marron; Callan-Gartlan (Cluster B)
4Finnegan / Flanagan / Finegan6+Donaghmoyne / MonaghanCluster-level connector — appears as intermarriage partner across Gartlan, Cluskey, McEneaney, Clarke, Hamill lines
5McEneaney / McNerney / McNaney4+Donaghmoyne / MonaghanMary McEneaney Hoey (1841–1900); McEneaney Flanagan (1844–1913); McEneaney McKittrick; "McEneaney McNaney M" appears as Peter McGeough (1788–1869) wife in some trees (naming ambiguity — see Worked Example 4)
6Hoey / Hoey-Kirk3+Termonfeckin (Louth) → Donaghmoyne via marriageP.H.; B.H.; Anne Hoey Kirk in deeper trees
7Trainor / Traynor / Treynor4+Documented origins: (a) Athlone, Ireland (Rodriguez line per 1880 Clay County IL marriage record); (b) Ireland with no county recorded (Cory Stowell line per 1868 Livingston County MI death record). Trainor surname has documented County Monaghan presence broadly, but no specific case-study Trainor is documented to a Monaghan parish.Two distinct Trainor branches in the cluster connect through different ancestral patterns: (1) Rodriguez line — Cluster B: earliest documented Trainor ancestor is Thomas Trainor (b. c.1833 Athlone Ireland; father Owen Trainor; mother Mary J. Macaslin; first marriage to Nancy Bell Powell 1880 Clay County IL). Three-generation × four-platform documented descent: S.T.R. (b.1939) → F.R. (b.1961) → B.R. (b.1991), see Worked Example 6. (2) Cory Stowell line — Cluster A: Trainor Traynor Treyno (b. c.1796 Ireland, d. 1868 Brighton MI) + Mary Hamill (b. c.1800, d. 1860). Cluster connection of this branch runs through Mary Hamill's documented Hamill maiden surname rather than her husband's geographic origin. The two Trainor branches share a cluster surname and proximate generational range, but specific common Trainor ancestor is not documented. Geographic mechanism connecting either branch to the Donaghmoyne network specifically remains open documentary research (L-041, L-043).
8Kirk / Kirke3+Donaghmoyne areaBernard Kirk; Hugh Kirk; Mary Kirke Hamill
9Quigley3+Donaghmoyne / MonaghanMary Hamill Quigley; John Quigley (1762–1831) + Elizabeth Brennan; K.McE.'s grandfather generation
10McMahon3+Louth / MonaghanJohn McMahon Louth (1764–); Mary McMahon (Owen Hamall's mother); K.McE.'s grandfather
11Murtagh / Murta3+Inniskeen / MonaghanP.H. maternal Dowdall-Murtagh; Margaret Murtagh (1889–1981); N. Murtagh Murta (1842–1915)
12Clarke3+Donaghmoyne / CarrickmacrossA.C.; R.C.; Terrance T. Clarke (Carrickmacross) in D.O. tree
13Woods3+Donaghmoyne; Louth-side McArdle/McParlandAnn Woods McGeough (1810–1881, S.M./M.R. line); K.W. and G.Wo. Cluster B with Clark/McArdle/McParland-Louth line; "Bridget McGough Woods" attribution as Peter McGeough wife (naming ambiguity)
14McCabe2+Magheracloon / DonaghmoyneJohn McCabe (1749–1811) → J.S.; Bridget McCabe DNA-confirmed in M.G. tree
15Cumiskey / Comiskey2+Carrickmacross / MonaghanAnderson Cumiskey Cl (1908–1981) in J.K. tree; P.H. unknown-grandfather hypothesis
16McDonnell / McDaniel2+Monaghan / TyroneJames McDaniel (1680–1719) + Ann Browne — shared ancestor of A.W. and R.S. independently in their respective trees
17Marron2+MonaghanMary Gartlan Marron (1812–1886) in P.G. tree; C. Marron Gartland (1841–1892) in M.G. tree; D.M. Cluster C (Marron + Hanratty)
18McGinn3+Donaghmoyne / MonaghanJames McGinn (1785–1860) + Anne Duffy McGinn (1788–1872), grandparents of A. McGinn McGeough (Henry McGeough's wife) in B.U./G.W. trees; L.H. McGinn-Smith Monaghan-to-Quebec line; J.K-C. McGinn maternal connection. Anne Duffy McGinn likely close kin to Anne Duffy Gartlan (research lead — Section 10).
19Macaslin / McAslin3+Origin not documented in primary sources accessed for this analysis. Surname has documented Scottish-Gaelic origins extending into Ulster, but no specific case-study Macaslin is documented to a particular Irish parish.Mary J. Macaslin is the documented mother of Thomas Trainor (Rodriguez line) per 1880 Clay County Illinois marriage record (license #475). Surname appears across F.R., B.R., H.R. trees through this maternal line. The Macaslin surname does not appear elsewhere in the chromosome 2 cluster signature, so cannot be assumed to provide a Donaghmoyne-bridge mechanism for the Rodriguez-Trainor cluster connection. Origin and earlier-generation documentation is open research priority (L-041).
20Sutherland / Callan2+TBD — likely Monaghan/Louth borderJ.Su. and C.A. share Callan-Gartlan ancestry (close kin per shared cM); 1,910 cM internal match indicates parent-child or full sibling within their nuclear family
21McArdle / McParland / Killough / Shevlin2+ eachLouth-Monaghan border (Carrickmacross / Inniskeen extending to Louth)Cluster B Louth-side surname signature: K.W., G.Wo., M.D.S., M.K. — collateral marriages of Donaghmoyne paternal line into Louth-side spousal families
22Halligan / Cluskey / Mathews / Hand / Costello / Duffy / Casey / Connolly / CallaghanMultiple 1-matchDonaghmoyne adjacentAdjacent surnames concentrated in single trees that strengthen the geographic specificity of the cluster signature

The geographic concentration is the central analytical fact. The surnames distribute primarily across four parishes — Donaghmoyne, Magheracloon, Inniskeen, and Carrickmacross — in southeast County Monaghan, with extensions into adjacent County Louth (Termonfeckin and Dundalk). This corresponds to a coherent pre-Famine Catholic community of approximately 15–25 square miles, within which the documented marriage patterns show repeated intermarriage across the same surname families over three generations.

The pattern is genetically and demographically consistent with an endogamous parish community: a Catholic population restricted in marriage choice by religious affiliation, geographic isolation, and limited transportation, in which the same families intermarried repeatedly. For DNA matching, endogamy produces exactly the signature observed here — multiple independent surname lines sharing the same chromosomal segments because they all descend from a small founding population that contributed DNA broadly across the community.

What the surname signature does not establish on its own is any specific most-recent-common-ancestor relationship between the subject's direct line and any individual cluster member. Identifying that a cluster of matches descends from a small Donaghmoyne population is a population-level finding, not a genealogical one. The genealogical work — identifying the specific ancestral couple through whom the subject and a given match share descent — requires documentary research in pre-Famine and early-Famine Catholic parish records. The Peter McGeough finding in Worked Example 4 is the first specific MRCA identified at this level for the chromosome 2 cluster; the Trainor-Hamill Michigan branch (Section 10 Path Forward) is the next candidate currently in active investigation.

Methodological note on tree-derived ancestry

The surname signature draws on documented ancestry in the trees of cluster matches. For most matches, the relevant ancestral lines have been verified by the author against primary sources: Catholic parish baptismal and marriage registers, civil registration records, Griffith's Valuation, and emigration documentation. Where a match's tree was incomplete or absent, the author independently constructed the relevant pedigree from primary records before referencing the surname connection.

Pre-1800 ancestral attributions appearing in user trees — particularly the recurring "James Hamell I (1652–)" and similar deep-genealogy claims — have not been independently verified for this analysis. They appear in multiple cluster matches' trees, which is suggestive but consistent with shared use of a community-circulated source rather than independent documentation. These attributions are noted as research leads, not as evidence supporting the cluster-level finding.

7. Worked Examples: Methodology in Action

Four matches and one MRCA identification that illustrate the analytical framework end-to-end

The full analytical workflow is most clearly demonstrated through specific worked examples. Each of the four below shows how the methodology was applied to one match or one MRCA identification, what the evidence established, and what remains open for future research.

Worked Example 1

T.S., the Andrew Hamill Question, and Cluster A's Two Sub-lines

The Match

T.S. is a confirmed paternal-line match. She shares 24.6 cM with the subject across the chromosome 2 Cluster A region (segment 30,526,780 – 51,604,274), and her one-to-one comparison against the reconstructed paternal kit returned a confirmed paternal segment. Her family line traces through documented Monaghan-born ancestors.

The Initial Hypothesis

T.S.'s online tree initially appeared to attribute her paternal Hamill line to County Antrim — the surname tag "Antrim" appeared on her ancestor Andrew Hamill (1793–1866). Read at face value, this would have placed her Hamill ancestry in the Plantation-era Antrim Hamill population — distinct from the Catholic Donaghmoyne Hamills who form the subject's direct line. The initial interpretation was that the chromosome 2 cluster might predate the Plantation surname divergence, with both Antrim and Donaghmoyne Hamills carrying a deeper common segment.

The Conflicting Evidence

The 1881 England Census record for James Anthony Hamill (Andrew Hamill's son, born 1818) settled the question definitively. The census enumerator recorded James as age 63, residing at 1 In 4 Court Freemasons Row, Liverpool, occupation tailor, marital status widower, and — critically — under the column "Where born": Monaghan, Ireland. This is primary documentary evidence that James Anthony Hamill was Monaghan-born. His father Andrew Hamill (1793–1866) was therefore part of a Hamill family demonstrably present in County Monaghan by the early 1810s, regardless of any Antrim attribution that may have entered T.S.'s user tree from a downstream source.

The Cluster A Multi-Line Picture

T.S. is not the only Cluster A match. Two additional matches in Cluster A — R.vE. (27.40 cM, segment 30,319,618 – 52,338,106) and N.L. (11.20 cM, segment 43,121,284 – 51,514,659) — descend from a documented Owen Hammel (d. 1858 Wisconsin) who married Nancy King. This is a separate Wisconsin Hammel emigrant family, explicitly distinct from the subject's own Owen Hamall (1847–1898) Chicago line. Several additional Wisconsin Hammel descendants appear in the Cluster A shared-match matrix without captured segment data yet (L.F., L.Lo.). T.S. and R.vE. triangulate at approximately 21 megabases of shared chromosome 2 segment — Antrim-attributed Hamill descendant and Wisconsin Hammel descendant sharing the same physical DNA. The triangulation is genealogically informative: it suggests both branches descend from a deeper Hamill origin pre-dating their early-19th-century divergence into separate Donaghmoyne/Antrim and Wisconsin emigrant lines.

A Third Cluster A Branch — Trainor-Hamill Michigan

A third Cluster A branch surfaces through C.S., L.K., and E.McG. — three matches whose Ancestry trees converge on a Trainor-Hamill couple emigrating from Ireland to Michigan: a Trainor patriarch (1796–1868) married Mary Hamill (1800–1860). Mary Hamill's birth generation (circa 1800) is in the right range to be a sibling, first cousin, or close kin of Andrew Hamill (1793–1866, T.S.'s line) and of the subject's own gg-grandfather Henry Hamall's parental generation. C.S. descends through the couple's son Edward E. Treynor (1840–1922); L.K. and E.McG. descend through the couple's daughter Mary E. Trainor McGue (1837–1921), who married Lawrence McGue (1831–1917). L.K. and E.McG. share a grandfather (John Lawrence McGue, 1909–2013) and therefore are not independent of each other, but C.S. provides a second independent confirmation line. Two independent descent paths confirm the Trainor + Mary Hamill couple's existence; documentation of Mary Hamill's birth parish (Section 10 Path Forward) would identify which Donaghmoyne or Antrim Hamill family she belonged to.

Resolution and What Remains

The corrected interpretation places Andrew Hamill (1793–1866) in the right generation to be related to Henry Hamall (the subject's great-great-grandfather, married Mary McMahon at Donaghmoyne in 1841). Andrew was approximately fifteen to twenty-five years older than Henry, consistent with being an older brother, paternal uncle, or first cousin. The Cluster A multi-line picture suggests two distinct Hamill paternal sub-lines existed in Donaghmoyne by the early 19th century, both descending from a shared earlier Donaghmoyne or broader Ulster Hamill ancestor but having diverged into genealogically distinct households by the time of the four documented Donaghmoyne couples. Andrew Hamill (T.S.'s line) and Henry Hamall (subject's line) likely sit in one sub-line; the Wisconsin Owen Hammel and the Michigan-emigrant Trainor-Hamill couples represent additional offshoots. Pre-1834 Hamill family reconstruction in Donaghmoyne parish requires alternative pre-Famine sources (Catholic Qualification Rolls 1778–1790, estate records, Tithe Applotment Books 1823–1838).

Status: Cluster A membership confirmed via segment triangulation between three independent emigration branches (Antrim-attributed Hamill via T.S., Wisconsin Hammel via R.vE. and N.L., Michigan Trainor-Hamill via C.S. and L.K.+E.McG.). Specific MRCA at the Donaghmoyne or earlier Ulster generation remains a research hypothesis pending pre-Famine documentary work. The case demonstrates BCG-standard exhaustive search and conflicting-evidence resolution, plus how multi-line triangulation strengthens cluster-level claims.
Worked Example 2

J.L., E.F., and the Gartlan Branches

The Matches

J.L. (Joseph J. Leon Sr., born 1933) and his close relatives J.1 and J.2 — kits that share 3,580 or more cM with each other, indicating either parent-child or full-sibling relationships within his family — are confirmed paternal-line matches in the chromosome 2 Cluster C. E.F. (Elizabeth McVerry Farrell, born 1949), residing in Ireland, is J.L.'s first cousin per Ancestry's predicted relationships and shares the same documented Gartlan ancestry.

The Documented Descent

J.L. descends through his mother Mary Ann McVerry (1908–2004), who was the daughter of B. Gartland McVerry (1875–1959). B. Gartland McVerry's parents are documented as Patrick Gartlan (1843–1920) and M. Finnegan Gartlan (1842–), with Patrick Gartlan's parents identified in the family record as Daniel Gartlan and Anne Duffy Gartlan. E.F. descends from the same Patrick Gartlan + M. Finnegan Gartlan couple via her grandfather Michael I. McVerry (1910–1986), Mary Ann McVerry's brother. Three to four kits total descend from this single Gartlan ancestral couple in the cluster.

The Convergence Pattern

Two additional cluster matches independently document Gartlan ancestry from different branches. M.G. (MyHeritage) descends from the couple Hugh Gartlan and Kerley Kirley Gartlan through a separate line, and the same Hugh + Kerley couple also appears in P.G.'s tree on Ancestry. P.G.'s maternal Holland line includes the additional ancestor Mary Gartlan Marron (1812–1886) — a fourth Gartlan branch in a single tree. Beyond the chromosome 2 cluster, JGS documented descent from James Hamill of Dian places her line through Patrick P. Gartlan Jr. and A. McEvoy Gartlan, a fifth distinct Gartlan branch. Two additional Cluster B matches (J.Su. and C.A.) carry a Callan-Gartlan signature, representing a sixth and seventh related Gartlan-adjacent branch.

What This Pattern Demonstrates

At least four to five independent Gartlan branches surface in the cluster. The convergence point, on the available tree evidence, lies somewhere in the late 18th century: possibly Daniel Gartlan Jr. (born approximately 1720s, attested in user trees as a son of Daniel Gartlan Sr. 1688–1732) or Peter Patrick P. Gartlan (1750–1824) and Marie Tealy. Pre-1800 attributions are tree-derived and require independent documentary verification.

Status: The Patrick Gartlan + M. Finnegan Gartlan branch is documented through parish records and confirmed via segment evidence. The deeper Gartlan ancestral relationships across branches remain a research hypothesis pending pre-Famine documentary work in Catholic Qualification Rolls, estate records, and surviving Tithe Applotment Books for Donaghmoyne.
Worked Example 3

P.H. Across Three Chromosomes

The Match

P.H. is the highest-cM cluster member at 38.5 cM total shared cM with the subject. He resides in Dundalk, County Louth, with paternal family from the village of Termonfeckin, also in County Louth. His one-to-one comparison against the reconstructed paternal kit returned three confirmed paternal segments rather than one — distinguishing him from the typical single-segment cluster matches.

The Three Confirmed Segments

P.H.'s paternal segments with the subject's father span chromosomes 2, 4, and 16. The chromosome 2 segment at 36,069,858–72,096,992 (35.8 cM, 6,239 SNPs) falls in the main Cluster C region — the largest single Chr 2 segment captured in the analysis when measured against the reconstructed paternal kit (TKH ↔ P.H.). This 35.8 cM is larger than P.H.'s shared cM with the subject directly (24-cM-range component of the 38.5 cM total) because the reconstructed kit captures the father's complete paternal chromosome before recombination split it among his children. The chromosome 4 segment is at 67,525,255–75,738,235, 7.2 cM, 973 SNPs — late chromosome 4, distinct from the Cluster C-adjacent regions. The chromosome 16 segment is at 84,412,028–86,149,757, 7.3 cM, 359 SNPs. Both smaller segments are above the standard 7 cM IBD reliability threshold but at its lower bound; for BCG documentation purposes they are flagged as reliable but at the margin of reliability for autosomal segment evidence.

P.H. multi-chromosome paternal segments Three chromosome tracks showing P.H. confirmed paternal segments shared with the subject's father's reconstructed kit: 35.8 cM on chromosome 2, 7.2 cM on chromosome 4, and 7.3 cM on chromosome 16. P.H. — three confirmed paternal segments across chromosomes 2, 4, and 16 GEDmatch one-to-one comparison: kit DW2855383 vs reconstructed paternal kit TX6596516 Chr 2 0 25 50 75 100 125 150 175 200 225 Mb 35.8 cM 36.1–72.1 Mb Chr 4 0 25 50 75 100 125 150 175 Mb 7.2 cM 67.5–75.7 Mb Chr 16 0 25 50 75 Mb 7.3 cM 84.4–86.2 Mb Total shared with reconstructed paternal kit: 50.3 cM across 3 segments — consistent with 3rd cousin or 3C1R range Chromosomes shown to scale; Chr 2 length 243 Mb, Chr 4 length 191 Mb, Chr 16 length 90 Mb

P.H.'s three confirmed paternal segments shown across chromosomes 2, 4, and 16, with each chromosome drawn to scale by its actual GRCh37 length. The chromosome 2 segment at 35.8 cM is the largest single chromosome 2 paternal segment captured in the analysis when measured directly against the subject's father's reconstructed kit. The chromosome 4 segment at 7.2 cM and chromosome 16 segment at 7.3 cM are smaller but above the IBD reliability threshold. Three independent paternal segments are unlikely to survive recombination intact across many generations, supporting a 3rd cousin or 3C1R kinship range — closer than the typical 4th-cousin range associated with single-segment cluster matches.

The Bridging Marriage

P.H.'s paternal Hoey line is rooted in Termonfeckin, County Louth — outside the Donaghmoyne parish where the cluster's surname signature concentrates. The connection to the Donaghmoyne population runs through a single documented marriage: P.H.'s great-grandfather Michael Hoey (1835–1911) married Mary McEneaney (1841–1900), and Mary McEneaney's family was Donaghmoyne-rooted. The chromosome 2 cluster connection to P.H. flows through this McEneaney line, not through the Hoey paternal surname. The Termonfeckin–Donaghmoyne marriage axis (approximately 25–30 miles distant) is consistent with documented County Louth–County Monaghan migration and intermarriage patterns of the early to mid-19th century.

Implications for Kinship Range

Multi-chromosome paternal sharing of three segments is a stronger kinship signal than single-segment sharing of equivalent total cM. A single segment of 38.5 cM could survive recombination across many generations; three independent paternal segments are unlikely to survive intact across the same distances. Combined with the segment lengths involved, the evidence places P.H.'s most-recent common ancestor with the subject's father in roughly the 1820s–1850s Donaghmoyne generations — consistent with the documented timeframe of the four-couple Donaghmoyne network. P.H. is therefore likely a 3rd cousin or 3C1R, closer than the typical 4th-cousin range associated with single-segment cluster matches.

Three Independent Chromosome 4 Paternal Segments — Not a Cluster

P.H.'s 7.2 cM chromosome 4 paternal segment is one of three independent chromosome 4 paternal segments now documented in this analysis through one-to-one comparison against the reconstructed kit. Two of the three were identified through a GEDmatch 3D Chromosome Browser comparison run with multiple cluster matches simultaneously. M.B. (GEDmatch kit RS8275897) returned a confirmed paternal segment on chromosome 4 at 23,875,311 – 27,459,128, 7.6 cM — the early region of chromosome 4. M.S. (kit A101561) returned a 21.8 cM confirmed paternal segment on chromosome 4 at 38,728,076 – 64,474,350, mid-chromosome — the largest chromosome 4 paternal segment captured in this analysis and the second-largest paternal segment overall after B.R.'s 43.9 cM main cluster segment. P.H.'s chromosome 4 segment at 67,525,255 – 75,738,235 falls in the late chromosome 4 region.

With all three segments' precise coordinates now known, direct overlap comparison can be performed. The three segments occupy three completely separate regions of chromosome 4 — early (M.B. at 23.9–27.5 Mb), mid (M.S. at 38.7–64.5 Mb), and late (P.H. at 67.5–75.7 Mb) — with at least 11 Mb of intervening chromosome between each pair. There is no triangulation among the three segments. The "parallel chromosome 4 cluster" hypothesis the analysis previously held open as pending is therefore answered: there is no parallel chromosome 4 cluster. The three chromosome 4 paternal segments are three independent Donaghmoyne-network paternal contributions to the subject's father's genome, each surviving recombination from a different ancestral pathway within the network.

This is a stronger finding than a parallel cluster would have been. A single shared chromosome 4 segment surviving across multiple Donaghmoyne descendants would have indicated a single ancestral source contributing the same physical DNA to the subject's father through multiple lines. Three non-overlapping segments instead indicate that the Donaghmoyne network's paternal contribution is broadly distributed across the chromosome — with M.B.'s segment plausibly tracing through the Drumaconvern Hamill descent path documented in her tree (Section 6 surname signature), M.S.'s segment tracing through the Susan Hamill McCanna descent path documented in Worked Example 5, and P.H.'s segment tracing through the Hoey-McEneaney descent path documented above. Each chromosome 4 segment has its own implicit MRCA within the Donaghmoyne network rather than a shared one. The pattern is consistent with the broader endogamous Donaghmoyne community signature observed in the chromosome 2 cluster: multiple ancestral lines contributing scattered segments to descendants of the network.

An additional observation worth flagging for follow-up: P.H.'s chromosome 2 segment endpoints (36,069,858–72,096,992) closely mirror those of D.E.'s chromosome 2 segment as captured in the broader cluster data (36,096,465–72,308,674, 39.23 cM). Near-identical Chr 2 boundaries between two cluster matches — though not SNP-precise like the J.C./G.W./B.U. identical-boundary sub-cluster (Worked Example 4) — could indicate close-kinship structural sharing between P.H. and D.E. similar to (though less precise than) the Peter McGeough identical-boundary trio. Reciprocal one-to-one comparison between P.H. and D.E. on GEDmatch is flagged as a research lead.

An Auxiliary Hypothesis

P.H. has shared with the author that his paternal grandfather Louis Michael Hoey (1920–1987) had an unknown father — family tradition suggests possibly a Comerford or Comiskey. The chromosome 2 cluster includes a separate match, J.K., whose tree includes the ancestor Anderson Cumiskey Cl (1908–1981). The Cumiskey/Comiskey surname appears as a possible bridge between P.H.'s undocumented paternal grandfather hypothesis and the broader Donaghmoyne network — but this connection remains exploratory and would require considerable documentary work to verify.

Status: Cluster membership confirmed via three independent paternal segments with precise coordinates documented (Chr 2 at 36,069,858–72,096,992, Chr 4 at 67,525,255–75,738,235, Chr 16 at 84,412,028–86,149,757). MRCA likely traces through P.H.'s McEneaney maternal-side ancestry in 1820s–1850s Donaghmoyne, with closer kinship range than typical cluster members. The Cumiskey paternal hypothesis is suggestive but exploratory. The chromosome 4 paternal evidence — three independent segments occupying non-overlapping regions of Chr 4 — confirms broadly distributed Donaghmoyne-network paternal contribution rather than a parallel cluster. P.H. ↔ D.E. near-identical Chr 2 boundary observation flagged for reciprocal triangulation analysis.
Worked Example 4

The Identical-Boundary Sub-cluster and Peter McGeough (1788–1869)

The Match Trio

Three matches in the chromosome 2 cluster — designated J.C., G.W., and B.U. — share segments with the subject that are identical to the SNP. All three boundaries are 36,862,239 – 59,041,432; all three at 21.09 cM and 4,682 SNPs. Identical-SNP boundaries across three independent matches are not the typical signature of distant cousin matches, where individual segments overlap but boundaries vary. Identical boundaries indicate either a tight recombination hotspot at those exact coordinates or descent from a shared ancestor through paths recent enough that the segment hasn't recombined further. Tree analysis of all three matches resolves the ambiguity in favor of the latter.

The Tree Convergence

Independent documentary investigation of all three matches' Ancestry trees reveals convergence on a specific ancestral couple. G.W.'s line traces through her grandmother V McGough Wetten (1907–2001) → Henry A McGough Sr (1887–1978) → Thomas E McGough → Henry McGeough (1807–1872) → Peter McGeough (1788–1869). B.U.'s line traces through his grandmother Jane E Wetten Muntz (1935–2022) → V McGough Wetten (1907–2001) → the same path back through Henry McGeough → Peter McGeough. J.C.'s line traces through O McGoff McGeough (1888–1958) → an intermediate generation hidden in his Ancestry tree's compressed display → Peter McGeough (1788–1869). All three trees identify Peter McGeough (1788–1869) as a documented ancestor, and his entry in J.C.'s tree carries an Ancestry MRCA-confirmation marker.

The Recent-Kinship Component

B.U. and G.W. share V McGough Wetten (1907–2001) as a great-grandmother (B.U.) and grandmother (G.W.). They are first cousins once removed (1C1R) to each other. This recent shared ancestor explains the SNP-precision of their boundaries — when two matches share an ancestor only three to four generations back, segments inherited from that ancestor have not yet had time to recombine differently in their two lines. Identical boundaries are exactly the expected genetic signature.

The Older Convergence

J.C. converges on Peter McGeough at a greater generational depth, via O McGoff McGeough (1888–1958) — a different branch of Peter's descendants. J.C. and the B.U./G.W. line are more distantly related to each other than B.U. and G.W. are between themselves, but all three trees converge on the same Peter McGeough ancestor. The fact that J.C.'s segment retains the same precise boundaries as B.U.'s and G.W.'s is the analytically interesting observation: the segment has been inherited through different post-Peter-McGeough descent paths and arrived at the subject through Peter's contribution to her own line, all without the boundaries shifting. This is consistent with descent through a single ancestral chromosome inherited intact through multiple branches.

Independent-Line Counting

For evidence-tier purposes: B.U. + G.W. count as one effective independent line via their recent V McGough Wetten kinship. J.C. counts as a second independent line via the O McGoff McGeough branch. The identical-boundary sub-cluster therefore represents two effective independent confirmation lines for Peter McGeough (1788–1869) as MRCA. Combined with separate cluster members descending from Peter McGeough's other documented son Michael McGeough (1806–1881) — namely S.M. and M.R. (Section 5.1) — the broader Peter McGeough descent network in the cluster represents three to four independent confirmation lines.

A Wife Naming Ambiguity

Peter McGeough's wife is identified differently across the three trees. J.C.'s tree shows "McEneaney McNaney M" as Peter's wife. G.W.'s tree shows "Bridget McGeough (1788–)" with no maiden surname. The author's existing Ancestry group label for the McGeough cluster matches uses "Bridget McGough Woods" — incorporating a Woods maiden surname attribution from an unidentified source. Possibilities include: Peter had two wives at different times; Bridget Woods's mother was a McEneaney; tree errors in one or more downstream sources. Resolution requires Donaghmoyne Catholic parish marriage records (post-1834 parish registers may include retrospective entries; pre-1834 sources via Ulster Historical Foundation or PRONI estate records). The identical-segment evidence stands independently of which wife the segment came through.

Why This Finding Matters

The Peter McGeough identification is the first specific most-recent-common-ancestor named for any portion of the chromosome 2 cluster. Up to this point, the case study has carried cluster-level findings (the existence of an endogamous Donaghmoyne genetic population, the subject's paternal-line membership in it) without specific-MRCA-level findings (which ancestral couple in that population is the subject's shared ancestor with which cluster member). Peter McGeough (1788–1869) is now a documented MRCA for at least one identifiable sub-cluster, with the segment evidence and tree convergence both pointing to the same conclusion. He is the chromosome 2 cluster's first BCG-documentable specific ancestral identification.

Status: Tree convergence across three independent kits confirms Peter McGeough (1788–1869) as MRCA for the identical-boundary sub-cluster. SNP-precise segment boundaries explained by 1C1R kinship between B.U. and G.W. via V McGough Wetten. Wife identity ambiguity remains a documentary research priority. Pre-1834 generations of Peter's parents (James McGeough → Owen McGeough in tree-attestations) await independent verification through Donaghmoyne Catholic parish records and pre-Famine Ulster sources.
Worked Example 5

M.S. and the Susan Hamill McCanna Branch — Segment Evidence Meets a Documented Couple

The Match

M.S. (GEDmatch kit A101561, 1925–2019) is a confirmed paternal-line match. Her one-to-one comparison against the reconstructed paternal kit returned a 21.8 cM confirmed paternal segment on chromosome 4 at 38,728,076 – 64,474,350 (Build 37) — the largest chromosome 4 paternal segment in the analysis and the second-largest paternal segment overall. The GEDmatch 3D Chromosome Browser comparison documented her segment relationships with several other cluster members in addition to the subject's father.

The Documented Descent

M.S.'s Ancestry tree shows the following descent chain: M Sheridan Green (1925–2019) → John P Sheridan (1889–1954) and Mary Louise Hausser (1887–1961) → on the paternal side, Patrick John Sheridan (1865–1942) and E McCanna Sheridan (1868–1937) → Charles McCanna (1816–1897) and Susan Hamill (1835–1917). Susan Hamill is one of the four documented Donaghmoyne Network couples carried forward across the broader case study. Her marriage to Charles McCanna and their family in Joliet, Illinois has been documented through prior research at the PROVEN evidence tier. M.S.'s segment evidence is the first segment-level paternal-line confirmation of this documented couple's connection to the subject's direct paternal line.

What This Establishes

Up to this point, the case study's segment-level evidence has confirmed cluster-level paternal sharing across multiple Donaghmoyne-network family lines but has not provided segment-level evidence connecting any of the four documented Donaghmoyne couples directly to the subject's paternal line through tree-confirmed descent. M.S. provides exactly that connection. Her tree-confirmed descent from Susan Hamill (1835–1917) plus her 21.8 cM confirmed paternal segment with the subject's father together constitute documented genetic-genealogical evidence of cross-line paternal sharing between a four-couples line and the subject's direct line. The expected shared cM range between the subject's father and a fourth cousin (descended from a sibling of the subject's gg-grandfather) is approximately 13–14 cM average; M.S.'s 21.8 cM is on the higher end but well within the third-cousin to fourth-cousin range, consistent with a sibling or first-cousin relationship between Susan Hamill and the subject's gg-grandfather Henry Hamall at the Donaghmoyne parental generation.

The James Hamill Marker

M.S.'s tree shows Susan Hamill's parents as "James Hamill *" — with the asterisk indicating an Ancestry DNA-confirmed marker — and "C Dougherty Hamill". The asterisk notation is significant. If "James Hamill *" is the same documented individual who fathered the heads of the other three four-couples lines (i.e., if Henry Hamall, Owen Hammel, James Hamill of Dian, and Susan Hamill McCanna are siblings or close cousins of a single James Hamill couple), then M.S.'s segment evidence corroborates the four-couples sibling hypothesis at the genetic level. This is the highest-stakes documentary research lead currently identifiable for the Hamill paternal-line MRCA question, and it is flagged as such in Section 10. Investigation pathway: contact M.S.'s tree manager via Ancestry to identify the primary source(s) underlying the "James Hamill *" DNA-confirmed marker.

The McMahon Connection

A second analytical thread surfaces in M.S.'s tree at the Charles McCanna parental generation. Charles McCanna's parents are shown as Patrick McCanna (1768–) and Mary McMahon McCanna. The subject's research has previously documented Mary McMahon (died 1874 Montreal) as Owen Hamall's mother. The two Mary McMahons are different individuals — Charles McCanna's mother was born approximately 1780–1790 (one generation earlier than Owen Hamall's mother) — but the recurrence of the McMahon surname in mother positions across two of the four-couples lines suggests a possible shared Donaghmoyne or adjacent-Louth McMahon family origin. McMahon family reconstruction in Donaghmoyne and Louth Catholic parish records is flagged as a research lead, supporting the broader observation that the Donaghmoyne network's endogamy operated through reciprocal marriages across a small set of community surnames rather than through unidirectional Hamill-line descent alone.

Cross-Cluster Segment Sharing

Beyond her direct paternal segment with the subject's father, M.S.'s GEDmatch comparison documents shared segments with several other cluster members. With T.S. (Cluster A — Worked Example 1): a 22.6 cM segment on chromosome 2 at 31,347,637–51,572,228, a 12.0 cM segment on chromosome 2 at 221,290,227–229,757,034, a 7.0 cM segment on chromosome 5 at 115,206,937–123,416,065, and a 15.6 cM X-chromosome segment at 46,619,695–78,078,155. With Bill H (a Hamill-surnamed match outside the chromosome 2 paternal cluster): a 10.5 cM chromosome 15 segment at 27,277,045–31,820,841. With Julie Greenheck Shewman: two X-chromosome segments. The pattern indicates that M.S. has accumulated DNA across multiple Donaghmoyne-network ancestral lines, consistent with the endogamous Donaghmoyne community's high cross-line sharing. Notably, M.S. shares chromosome 2 segments with T.S. in the same cluster region as TKH ↔ T.S., but does NOT share chromosome 2 with TKH directly — most likely indicating that M.S. and TKH inherited different paternal alleles at the chromosome 2 cluster region, while both shared ancestry with T.S. through the broader Hamill paternal community.

Status: ★ KEY FINDING. Segment-level paternal-line confirmation of the Susan Hamill McCanna four-couples line. Tree-attested "James Hamill *" DNA-confirmed marker as Susan Hamill's father; documentary verification of this attribution and cross-reference with the other three four-couples lines is the highest-stakes Hamill-line MRCA hypothesis test currently identifiable. McMahon connection flagged as additional research lead. The Susan Hamill McCanna couple is now promoted to CONFIRMED tier in the evidence framework (Section 8).
Worked Example 6

S.T.R., F.R., and B.R. — Three Generations × Four Platforms

The Match Family

Three generations of one family produce confirmed paternal segments with the subject — a structurally distinct evidence pattern from the single-match worked examples above. The line: S.T.R. (b. 1939, Missouri) → her son F.R. (b. 1961) → his son B.R. (b. 1991). Each generation has tested at multiple DNA platforms; each generation's chromosome 2 segment with the subject has been independently captured. The progressive segment trimming across generations — S.T.R. 60.22 cM → F.R. 49.32 cM → B.R. 42–45 cM — is the diagnostic signature of a single ancestral segment passing intact through successive parent-to-child transmissions, with expected recombination losses at each step.

Four-Platform Documentation

S.T.R.'s chromosome 2 segment with the subject is captured on FTDNA at 60.22 cM (positions 35,756,658 – 88,410,168, 19,951 SNPs) and corroborated by an Ancestry match summary (predicted Half 3rd cousin once removed or 4th cousin range). F.R.'s chromosome 2 segment with the subject is captured on 23andMe at 49.32 cM (36,179,192 – 80,590,889, 10,308 SNPs). B.R.'s chromosome 2 segment with the subject is captured on three platforms simultaneously: 23andMe (42.32 cM, 42,011,160 – 80,613,607), MyHeritage uploaded from 23andMe (45.4 cM, 41,860,854 – 85,427,109), and direct GEDmatch one-to-one against the subject's own kit (43.9 cM, 41,885,773 – 85,468,002, 7,530 SNPs).

Each platform's measurement is independently reported using its own SNP density, recombination map, and segment-detection algorithm, and the four measurements converge on the same chromosomal region with cM values differing within the noise band expected from cross-platform measurement variation. Three platforms × three generations × consistent segment positions is among the strongest single-family corroborations of cluster membership documented in this analysis. The Rodriguez-Trainor line's membership in the chromosome 2 cluster rests on this segment-level evidence — the algorithmic clustering snapshots in Section 4.5 confirm the same membership across multiple anchored views — independent of surname or geographic reasoning.

Rodriguez-Trainor three-generation × four-platform cluster line — chromosome 2 segment progression Stacked bar visualization showing the same chromosome 2 segment passing through three generations S.T.R. to F.R. to B.R., captured on four platforms (FTDNA, 23andMe, MyHeritage, GEDmatch), with progressive cM trimming as expected from generational recombination. Bottom track shows the reconstructed paternal kit one-to-one comparison returning the definitively-paternal portion at 29.6 cM (67% of the 43.9 cM total paternal sharing measured by the subject's own kit comparison). Rodriguez-Trainor cluster line — three generations × four platforms on chromosome 2 Single segment passes S.T.R. → F.R. → B.R. with expected generational trimming; reconstructed-kit comparison anchors paternal side 0 Mb 25 Mb 50 Mb 75 Mb 100 Mb 125 Mb DIRECT SEGMENTS WITH SUBJECT S.T.R. Gen 1 · FTDNA 60.22 cM F.R. Gen 2 · 23andMe 49.32 cM B.R. Gen 3 · 23andMe 42.32 cM B.R. Gen 3 · MyHeritage 45.4 cM B.R. Gen 3 · GEDmatch vs subject's kit 43.9 cM total paternal sharing RECONSTRUCTED PATERNAL KIT — DEFINITIVELY-PATERNAL ANCHOR B.R. Gen 3 · GEDmatch vs reconstructed kit 29.6 cM definitively paternal 29.6 cM / 43.9 cM = 67% sensitivity · 100% specificity Reconstructed kit recovers the definitively-paternal core; 33% gap reflects segments inherited only by absent fifth sibling GEDmatch MRCA estimates: 4.2 generations (subject ↔ B.R. via own kit) · 4.5 generations (reconstructed kit ↔ B.R.) → MRCA window approximately 1820–1840 birth (4–5 generations back from B.R., b. 1991) Reconstructed kit endpoints not captured in research log; bar width displayed proportional to cM ratio for sensitivity visualization

Three-generation × four-platform segment progression for the Rodriguez-Trainor cluster line. Top section: five direct segment measurements with the subject across three generations and four platforms — S.T.R. FTDNA (60.22 cM), F.R. 23andMe (49.32 cM), B.R. 23andMe (42.32 cM), B.R. MyHeritage (45.4 cM), and B.R. GEDmatch one-to-one against the subject's own 23andMe kit (43.9 cM, total paternal sharing). The cluster-membership color (gold, Cluster B per Section 4.3) is preserved on the platform-direct segments; the GEDmatch comparison against the subject's own kit is shown in forest green to flag the reconstructed-kit relationship. Bottom section: the same B.R. ↔ subject comparison rerun against the reconstructed paternal kit returns 29.6 cM — the definitively-paternal portion of the 43.9 cM total. The 67% sensitivity ratio is consistent with what four-sibling reconstruction recovers; the 33% gap is segments inherited only by the absent fifth sibling. The methodological discipline articulated in Section 2.1 — sensitivity traded for specificity — is here demonstrated at full empirical depth.

The Methodological Discipline — Two GEDmatch Comparisons

The most analytically valuable evidence in this worked example comes from a pair of GEDmatch one-to-one comparisons that together demonstrate the sensitivity-specificity tradeoff defining the case study's reconstructed-kit methodology. Both comparisons use B.R.'s 23andMe kit as input. Both target the same physical chromosome 2 region. The two comparisons return systematically different values, and the pattern of difference is exactly what the methodological discipline predicts.

The first comparison: the subject's own 23andMe kit ↔ B.R. Result: 43.9 cM single chromosome 2 segment at 41,885,773 – 85,468,002, 7,530 SNPs, GEDmatch-estimated MRCA 4.2 generations. This measurement captures the total paternal-line sharing between the subject's own DNA and B.R. — useful for relationship estimation, but with a fundamental ambiguity: the segment the subject inherited from her father could have come from either his paternal side (the Donaghmoyne paternal line) or his maternal side. From the subject's own kit alone, the segment's parental origin within her father's genome cannot be determined.

The second comparison: the reconstructed paternal kit ↔ B.R. Result: 29.6 cM single chromosome 2 segment in the same region, GEDmatch-estimated MRCA 4.5 generations. This measurement captures the definitively-paternal portion of the same shared segment — by construction, the reconstructed kit contains only the subject's father's paternal contribution, with maternal segments excluded by the phasing reference. The 29.6 cM figure is what survives when maternal-side ambiguity is removed.

The 67% sensitivity ratio (29.6 cM / 43.9 cM) is methodologically expected. The Borland Genetics four-sibling reconstruction recovers paternal segments only where at least one contributing sibling inherited the segment from the father. Segments inherited only by the absent fifth sibling (E., the independent validation reference of Section 2.2) are not represented in the reconstructed kit, and a portion of the 43.9 cM total paternal sharing between the subject and B.R. therefore cannot be recovered through reconstruction. The 33% gap is the cost of the methodology; the 67% definitively-paternal core is the benefit.

This is the discipline Section 2.1 articulates as the core trade-off of the reconstruction approach: sensitivity traded for specificity. The B.R. finding is the single most rigorous empirical demonstration of this discipline in the case study evidence base. Direct comparison establishes the segment exists; reconstructed-kit comparison establishes that it is paternal. Without the reconstructed-kit comparison, the Rodriguez-Trainor cluster connection would remain ambiguous in parental origin even at three-generation × four-platform documentation depth — the segment could in principle have entered the subject's genome through her mother's O'Brien line and produced exactly the same direct-comparison results. The 29.6 cM reconstructed-kit confirmation forecloses that alternative.

The MRCA Window

The two GEDmatch comparisons return MRCA estimates of 4.2 generations (subject's own kit ↔ B.R.) and 4.5 generations (reconstructed kit ↔ B.R.). Both are platform-algorithmic point estimates with inherent uncertainty in single-segment data; together they bracket a window of approximately 4–5 generations back from B.R. B.R. was born 1991. Five generations back lands roughly in the 1820–1840 birth window — consistent with the era of the four documented Donaghmoyne founding-couple marriages (Henry Hamall + Mary McMahon 1841, Owen Hammel + Anne Nancy King 1846, Susan Hamill + Charles McCanna 1857, James Hamill + Ann Gartlan).

Note that this MRCA estimate places the common ancestor in the right generational window. It does not in itself identify where in Ireland the Rodriguez-Trainor line connects to the Donaghmoyne network. The geographic mechanism is open documentary research, treated below.

The Earliest Documented Trainor Ancestor in This Line

The Rodriguez-Trainor family's earliest documented Trainor ancestor is established by an 1880 Clay County, Illinois civil marriage register (license #475, 31 July 1880). The record names Thomas Trainor — age 47 next birthday, occupation Rail Road, residence Xenia Illinois — marrying Nancy Bell Powell. The record specifies Thomas Trainor's place of birth as Athlone, Ireland, his father as Owen Trainor, and his mother as Mary J. Macaslin. This was Thomas Trainor's first marriage. Birth year derived from the recorded age: c. 1833.

Athlone straddles the River Shannon at the boundary of Counties Westmeath and Roscommon, in the central Irish midlands — approximately one hundred miles southwest of County Monaghan and outside the documented surname-distribution geography of the Donaghmoyne network as established by the chromosome 2 cluster's other members. This documented birthplace prevents straightforward inference that the Rodriguez-Trainor cluster connection flows through the Trainor surname's typical Monaghan distribution. The Macaslin maternal-surname provides no alternative geographic anchor either — Macaslin does not appear elsewhere in the chromosome 2 cluster's surname signature documented in Section 6, so the maternal line cannot be assumed to provide a Donaghmoyne-area bridge.

The analytical position this leaves: the Rodriguez-Trainor line's chromosome 2 cluster membership is confirmed at three-generation × four-platform documentation depth via independent segment-level evidence; the same membership is corroborated by 23andMe's algorithmic clustering across multiple anchored views (Section 4.5); and the MRCA window is consistent with the documented Donaghmoyne founding-couple era. What remains undocumented is the specific genealogical mechanism — through which earlier-generation ancestor and through which surname line — by which a family with documented Athlone-area Trainor descent connects to a Monaghan-rooted chromosome 2 paternal cluster. This question is recorded as the highest-priority active documentary research lead in the case study (L-041 in the project research log), and is not resolvable through autosomal DNA analysis at this generational distance.

Cross-Reference With the C.S. Trainor-Hamill Branch

A second Trainor branch surfaces independently through C.S. (P-038, Cluster A — see Worked Example 1). C.S.'s documented descent traces through Trainor Traynor Treyno (1796–1868) and Mary Hamill (recorded in tree as "Hammell Hamel Trainor", 1800–1860) — the Trainor + Hamill marriage discussed in Worked Example 1's Cluster A multi-line picture. A Livingston County, Michigan death record dated 28 September 1868 documents Trainor Traynor Treyno's death at age 72 years 3 months in Brighton, Michigan, with place of birth recorded as "Ireland" only — no county or parish on the primary source. The cluster connection of this C.S.-line ancestor to the Donaghmoyne network runs through his wife's documented Hamill maiden surname, which IS a documented cluster-signature surname; the husband's geographic origin remains documentary research priority. The S.T.R. / F.R. / B.R. line documented in this Worked Example 6 represents a distinct Trainor branch tracing through an Athlone-area Thomas Trainor and his presumed parental couple Owen Trainor and Mary J. Macaslin. The two Trainor branches share a cluster surname (Trainor) and proximate generational range, but the documentary evidence currently available is insufficient to determine whether they share a specific common Trainor ancestor. Resolving the relationship between these two Trainor branches — and identifying the specific ancestral line through which each connects to the Donaghmoyne network — would significantly strengthen the case study's account of how the Trainor surname relates to its paternal Hamill core.

Status: ★ KEY METHODOLOGICAL EXAMPLE. Three-generation × four-platform cluster confirmation across S.T.R. (FTDNA + Ancestry), F.R. (23andMe), and B.R. (23andMe + MyHeritage + GEDmatch one-to-one × 2). Definitively-paternal status established for B.R. via reconstructed-kit comparison (29.6 cM / 4.5 generations MRCA). MRCA window 4–5 generations back from B.R. (b. 1991) places common ancestor approximately 1820–1840 birth — consistent with documented Donaghmoyne founding-couple era. The earliest documented Trainor ancestor in this line is Thomas Trainor (b. c.1833 Athlone, Ireland; father Owen Trainor; mother Mary J. Macaslin) per 1880 Clay County Illinois marriage record (research log D-087 / S-022). Athlone is in the Irish midlands ~100 miles from County Monaghan, so the geographic mechanism connecting this line to the Donaghmoyne cluster cannot be inferred from Trainor surname distribution; Macaslin does not appear elsewhere in cluster signature. Cluster membership is established by chromosome 2 segment evidence independent of geographic reasoning. Active documentary research lead L-041 in the project research log: identify Owen Trainor + Mary J. Macaslin marriage parish; document Thomas Trainor c.1833 baptism; investigate earlier-generation Trainor and Macaslin lines for any Donaghmoyne-network connections. The 67% sensitivity ratio between direct (43.9 cM) and reconstructed-kit (29.6 cM) comparisons is the case study's most rigorous empirical demonstration of the methodological discipline articulated in Section 2.1: trading sensitivity for specificity to remove maternal-side ambiguity.

8. Updated Evidence Tier Framework

Where each connection in the broader Donaghmoyne case study sits given the new evidence

The December 2025 DNA Evidence Analysis page used a four-tier evidence framework: PROVEN, SUGGESTIVE, EXPLORING, and INDIRECT. The chromosome 2 evidence requires adding a higher tier and updating where specific connections sit. The framework below carries forward the December tiers and adds a new top-level CONFIRMED tier for findings now backed by segment-level triangulation plus reconstructed-kit paternal verification plus multi-platform cross-validation.

Confirmed

Donaghmoyne Genetic Network (population level)

An endogamous Donaghmoyne genetic population exists as an identifiable cluster shared across multiple emigrant family lines. The subject's paternal line descends from this population. The chromosome 2 segment 44,599,253 – 50,854,610 (6.25 Mb conservative core) is independently detected by 23andMe segment-level matching, MyHeritage's mathematical triangulation algorithm (TG2), and GEDmatch one-to-one comparison against the subject's father's reconstructed paternal kit. Cross-platform corroboration plus reconstructed-kit verification places this finding at the highest evidence tier available.

Confirmed

Peter McGeough (1788–1869) as identical-boundary sub-cluster MRCA

Three independent kits (J.C., G.W., B.U.) share SNP-identical chromosome 2 segments at 36,862,239 – 59,041,432. Tree analysis of all three confirms convergence on Peter McGeough (1788–1869) of Donaghmoyne. Tree-confirmed common ancestor + segment-level identical-boundary evidence + recent-kinship structural explanation (B.U./G.W. as 1C1R via V McGough Wetten) places this finding at CONFIRMED tier for the identical-boundary sub-cluster. Wife identity (McEneaney vs Bridget Woods) remains a documentary research question but does not affect the segment-level finding.

Confirmed

Susan Hamill (1835–1917) + Charles McCanna line — segment-level four-couples confirmation

M.S. is a tree-confirmed descendant of Susan Hamill (1835–1917) and Charles McCanna (1816–1897). Her 21.8 cM confirmed paternal segment with the subject's father's reconstructed kit (chromosome 4, mid-chromosome) is the first segment-level paternal-line confirmation linking one of the four documented Donaghmoyne couples directly to the subject's direct paternal line. The shared cM range is consistent with third-cousin to fourth-cousin kinship, supporting the four-couples sibling-or-cousin hypothesis at the genetic level. Documentary verification of the "James Hamill *" DNA-confirmed marker shown as Susan Hamill's father in M.S.'s tree is the highest-stakes pending Hamill-line MRCA documentary research lead.

Proven

Specific Family Sibling Groups

The James Hamill & Ann Gartlan sibling group is documented through Peter Hamill's 1949 death certificate plus DNA matches at expected kinship levels (23–228 cM internal). The Owen Hammel & Ann King family structure is documented through Wisconsin descendants with internal matches of 52–74 cM. The Susan Hamill & Charles McCanna family structure was previously established at this tier through Joliet descendants with internal matches of 27–67 cM and is now promoted to CONFIRMED tier above based on M.S.'s segment-level evidence. These findings remain established by combined documentary and DNA evidence.

Suggestive

Specific Cross-Line Relationships

Henry Hamall ↔ Owen Hammel (the brother hypothesis): now corroborated by segment-level paternal evidence in Cluster A in addition to the documentary parish-marriage record (Donaghmoyne 1841 and 1846) and the cross-line matches at 21–34 cM. The specific question of brother versus first cousin remains unresolved without pre-Famine documentary work.

Henry Hamall ↔ James Hamill of Dian: T.S. provides confirmed paternal segment evidence plus the 1881 census documentation of James Anthony Hamill's Monaghan birth. Andrew Hamill (1793–1866) is in the right generation to relate to Henry Hamall. Specific relationship requires documentary verification.

Trainor + Mary Hamill (1800) Michigan branch ↔ Henry Hamall's parental generation: two independent descendant lines (C.S., L.K./E.McG.) confirm the Trainor + Mary Hamill couple's existence in the right generation to be kin to the subject's gg-grandparental Hamill line. Specific relationship and Mary Hamill's birth parish remain documentary research priorities.

Exploring

Threshold-Level and Hypothesis-Stage Connections

Henry Hamall ↔ Susan Hamill McCanna: documented matches in the 8–15 cM range remain at the IBD threshold; segment-level analysis specific to this pairing has not been completed.

Susan Hamill ↔ Owen Hammel: sporadic matches identified in cross-line analysis, but the pattern is not yet sufficiently dense to support a specific MRCA hypothesis.

P. McGue McGeough (1800) ↔ Peter McGeough (1788–1869) sibling hypothesis: if confirmed by pre-Famine Donaghmoyne records, this single documentary find would tie Cluster A's Trainor-Hamill Michigan branch directly into Cluster C's McGeough Donaghmoyne paternal core via the Mary E. Trainor McGue + Lawrence McGue marriage.

Indirect

Connections Demonstrable Only Through Shared-Match Networks

Some cluster connections are visible only through Ancestry shared-match patterns or through tree-based documentary chains. These connections lack direct segment data because the relevant matches have not transferred kits to platforms supporting chromosome browsers. They are flagged as indirect cluster evidence.

9. Honest Boundaries

What this analysis establishes — and what it does not

9.1 What Is Now Established

An endogamous Donaghmoyne genetic population exists as an identifiable cluster, demonstrated through cross-platform segment evidence at five layered levels: independent identification through multiple search paths, mathematical triangulation across nine MyHeritage matches, 23andMe segment-level resolution into three distinct sub-clusters, cross-platform convergence on a 6.25 megabase conservative core confirmed by all three platforms, and direct paternal-inheritance confirmation through one-to-one comparison against the subject's father's reconstructed kit for at least nine GEDmatch-accessible cluster matches.

The subject's paternal line descends from this population. The reconstructed paternal kit demonstrates that segments shared between cluster matches and the subject also are shared between cluster matches and the subject's father directly, eliminating maternal-line ambiguity for the chromosome 2 cluster region.

Peter McGeough (1788–1869) of Donaghmoyne is documented as MRCA for the identical-boundary sub-cluster, with three independent descendant lines converging on him through tree analysis and SNP-precise segment evidence corroborating the kinship structure. This is the chromosome 2 cluster's first specific-MRCA-level finding.

Three distinct ancestral signals on chromosome 2 are documented through 23andMe segment-level analysis and corroborated by 23andMe's machine-learning DNA Relatives Clustering algorithm operating independently on shared-DNA patterns: a deeper Hamill origin (Cluster A / 23andMe Cluster 2) shared by Donaghmoyne, Wisconsin, and Michigan emigrant Hamill branches; a Louth-side spousal/maternal network (Cluster B / 23andMe Cluster 3) carrying Trainor, Macaslin, Gartlan, and related surnames; and the Donaghmoyne paternal endogamous core (Cluster C / 23andMe Cluster 1) within which Peter McGeough's identical-boundary sub-cluster sits. Segment-position analysis and machine-learning shared-DNA clustering converged on the same three-cluster grouping with cluster membership corresponding precisely between the two methods.

Cross-line genetic continuity is documented across at least 25 independent matches (with chromosome 2 segments captured) and 22+ recurring surnames concentrated in southeast Monaghan and adjacent Louth — a geographic specificity inconsistent with general Irish or European ancestral matching.

The Chicago paternal-line bottleneck that previously limited the case study's evidence base no longer constrains paternal-line analysis. The reconstructed paternal kit provides a stable comparator for any future paternal candidate match transferred to GEDmatch.

9.2 What Is Not Established

Specific most-recent-common-ancestor relationships for most pairs of cross-line matches at five-or-more generations distance remain unestablished. The Peter McGeough finding is one specific MRCA identified for one sub-cluster; the broader question of MRCA-level relationships across the four documented Donaghmoyne couples (James Hamill of Dian, Owen Hamall, Owen Hammel, Susan Hamill McCanna) remains open. The Trainor + Mary Hamill (1800) Michigan branch is documented as existing but its specific relationship to the subject's parental Hamill line awaits Mary Hamill's birth parish documentation.

Pre-1830 Donaghmoyne genealogy has not been resolved by this analysis. Catholic parish baptismal and marriage registers for Donaghmoyne begin in 1834. Earlier ancestral identification — including the parental generation of Peter McGeough (1788–1869), the wife-identity ambiguity for Peter, and Mary Hamill's (1800) birth parish and parents — requires alternative pre-Famine sources (Catholic Qualification Rolls 1778–1790, surviving estate records, the Morpeth Roll 1841, Tithe Applotment Books 1823–1838) that have not yet been systematically searched for the relevant family lines.

The P. McGue McGeough (1800) ↔ Peter McGeough (1788–1869) sibling hypothesis — which would tie the Trainor-Hamill Michigan branch directly into the Donaghmoyne McGeough paternal core via the Mary E. Trainor McGue + Lawrence McGue marriage — is documented as a research lead at Exploring tier and awaits pre-Famine documentary evidence.

User-tree attributions of pre-1800 ancestry remain suggestive but unverified. The recurring James Hamell I (1652–) ancestor in multiple cluster trees is an example: the attribution may reflect community-shared use of an early-published genealogy rather than independent primary-source documentation. The hypothesis is reinforced by the observation that the same James Hamell I attribution appears in trees of Hamill-surnamed testers who do not share segments with the subject's father at the 7 cM IBD threshold (including Steven Hammill, whose tree traces directly through Owen Hamell 1731 to James Hamell I 1652, but whose GEDmatch comparison returns zero shared segments with the reconstructed kit). If the deep ancestor were genuinely documented through descent, segment evidence would be expected to vary continuously across descendants; the binary pattern observed (some Hamill-surnamed testers share, some do not, regardless of tree attestation) is more consistent with multiple distinct Hamill paternal lineages converging on a community-shared ancestor narrative than with all the surnamed testers being descended from a single primary-source-documented founder. Until that founding narrative's source is identified and evaluated, the attribution is treated as a research lead rather than as evidence supporting any specific finding.

The Hamill surname is therefore necessary but not sufficient for membership in the Donaghmoyne paternal cluster. The cluster's Hamill signature is specific to one Catholic Donaghmoyne Hamill paternal line — the line shared by the subject's direct ancestry, T.S.'s Andrew Hamill (1793) line, M.S.'s Susan Hamill McCanna line (Worked Example 5), the Trainor-Hamill Michigan branch, and likely M.B.'s Drumaconvern Hamill line. Hamill-surnamed testers descending from Plantation-era Antrim or Down Protestant Hamills (likely the case for Brian S Hamill's "Hercules Hamill" line and possibly Bill H's Samuel Hamill line) or from Tyrone Catholic Hamills (likely the case for E.R.Q.'s Henrico Hamill line) are not part of the Donaghmoyne paternal cluster despite carrying the same surname. This finding strengthens rather than weakens the case study's interpretation: the cluster surname signature is specific, not generic, and reflects descent from a specific Donaghmoyne community rather than any random subset of Ulster Hamills.

The cluster-level versus MRCA-level distinction

The analytical structure of this case study after the chromosome 2 finding rests on a key distinction. Cluster-level evidence — the existence of the Donaghmoyne genetic network, the subject's paternal-line membership in it, the surname signature concentrating in a specific micro-region, and the three-cluster sub-structure on chromosome 2 — is established at BCG standard. Specific-MRCA-level evidence is now established for one identifiable sub-cluster (Peter McGeough's identical-boundary trio); for other portions of the cluster, MRCA-level evidence requires documentary research in pre-Famine Irish records and is not provided by autosomal DNA analysis at these generational distances regardless of methodology.

This distinction matters for how the broader Donaghmoyne Network case study should be framed going forward. Network-level claims and one specific-MRCA-level claim can now be made with confidence. Other specific-relationship claims (the four-couple sibling-or-cousin question; the Trainor-Hamill Michigan ↔ subject's Hamall line specific relationship) remain working hypotheses pending documentary work.

10. Path Forward

Documentary, genetic, and communication priorities identified by this analysis

Documentary Research

  • Mary Hamill (1800–1860) birth parish documentation — locate baptismal record, identify parents, document emigration to Michigan via Trainor marriage. Highest-stakes new documentary lead from the chromosome 2 analysis.
  • Sylvester Hamill of Drumaconvern documentation — Catholic Qualification Rolls 1778–1790, Tithe Applotment Books 1823–1838, PRONI estate records, and 1796 Catholic Convict List for Drumaconvern townland (Farney Barony, southeast Monaghan). Identify Sylvester's parents, dates, and any documentary connection to other Donaghmoyne-area Hamill heads-of-household. M.B.'s Chr 4 paternal segment confirms genetic descent connection; documentary work would identify the specific MRCA generation.
  • ★ Four-couples sibling hypothesis test via M.S.'s "James Hamill *" attribution — M.S.'s Ancestry tree shows Susan Hamill (1835–1917)'s father as "James Hamill *" with the asterisk indicating a DNA-confirmed marker. Investigation pathway: contact M.S.'s tree manager via Ancestry to identify the primary source(s) underlying the marker; cross-reference with the parental generation attestations in Henry Hamall's, Owen Hammel's (Wisconsin), and James Hamill of Dian's documented ancestries. If a single James Hamill couple is documented as parents of all four four-couples heads, the four-couples sibling hypothesis is documented at primary-source level. This is the highest-stakes Hamill-line MRCA documentary research lead in the case study.
  • McMahon connection investigation — Mary McMahon McCanna (Charles McCanna's mother, ~1780–1790) and Mary McMahon (Owen Hamall's mother, died 1874) are different individuals one generation apart but both born/married into the Donaghmoyne network. Search Donaghmoyne and Louth Catholic parish records for McMahon families 1750s–1810s. Test hypothesis that the two Mary McMahons share a common Donaghmoyne or Louth McMahon family origin — possible kinship layer in the network alongside the Hamill paternal layer.
  • P. McGue McGeough (1800) ↔ Peter McGeough (1788–1869) sibling hypothesis — Donaghmoyne and adjacent parish records 1780s–1810s; Catholic Qualification Rolls 1778–1790; PRONI estate records; Tithe Applotment Books 1823–1838. If confirmed, ties Cluster A and Cluster C into single ancestral story.
  • Peter McGeough wife identity resolution — Donaghmoyne parish records 1808–1815 marriage entries; resolve McEneaney vs Bridget Woods naming ambiguity.
  • Donaghmoyne Catholic baptismal records 1834–1860 — Hamill, Gartlan, McEneaney, McGeough family reconstruction
  • Magheracloon Catholic parish records — McCabe family verification (J.S. line)
  • Inniskeen Catholic parish records — Murtagh-Dowdall family for Hoey maternal line
  • Termonfeckin Catholic parish records — Hoey paternal line documentation
  • Pre-Famine sources for Gartlan family reconstruction — Catholic Qualification Rolls 1778–1790, PRONI estate records, Tithe Applotment Books 1823–1838
  • 1841 England Census — locate Andrew Hamill (1793–1866) and James Anthony Hamill family emigration timing
  • Anne Duffy McGinn (1788–1872) ↔ Anne Duffy Gartlan kin investigation — Donaghmoyne Duffy family reconstruction; possible sister relationship between two Donaghmoyne wives
  • Louth Catholic records — McMahon families 1790s–1810s for the Mary McMahon → Owen Hamall hypothesis

Genetic Research

  • Cluster A segment data completion — capture chromosome 2 segment coordinates for L.F., L.Lo., R.C., C.S., L.K. to triangulate the Cluster A multi-line picture
  • Investigate K.McE.'s second chromosome 2 segment at 99,529,858 – 111,996,750 — far-right of cluster, potentially separate ancestral signal worth tracing
  • Investigate E.R.Q.'s 7.3 cM Chr 20 segment with TKH in context of her documented Tyrone Hamill descent — determine whether this represents distant pre-Plantation Ulster Hamill kinship or coincidental sub-cluster sharing
  • Continue systematic one-to-one comparisons against the reconstructed kit for all paternal candidate matches as they are transferred to GEDmatch
  • Investigate P.H.'s chromosome 4 (67,525,255–75,738,235, 7.2 cM) and chromosome 16 (84,412,028–86,149,757, 7.3 cM) segments — identify any other cluster members sharing those regions; Chr 4 segment confirmed non-overlapping with M.B. and M.S. Chr 4 segments
  • P.H. ↔ D.E. close-kinship hypothesis — P.H.'s Chr 2 segment (36,069,858–72,096,992, 35.8 cM) and D.E.'s Chr 2 segment (36,096,465–72,308,674, 39.23 cM) have near-identical endpoints (boundaries within ~30 kb at start, ~210 kb at end). D.E. is not on GEDmatch, so direct reciprocal one-to-one comparison cannot be run; however, D.E.'s placement at the center of 23andMe Cluster 1 (Section 4.5) alongside P.H. and the Peter McGeough trio provides algorithmic corroboration. Tree investigation of D.E.'s ancestry combined with P.H.'s known McEneaney maternal-side line could identify a candidate MRCA at the McEneaney–Finegan or McEneaney–Clark intersection if these surnames intermarried in early-19th-century Donaghmoyne.
  • Tree investigation for thirteen new Cluster 1 members surfaced by 23andMe DNA Relatives Clustering (Section 4.5) — outreach via 23andMe messaging or Ancestry shared-match cross-reference. Priority based on surname suggestiveness: C.D. (Daly surname linking possibly to Inniskeen/Donaghmoyne Daly families), J.K. (Kilgannon — Sligo/Mayo origin), J.D. (Durkin — Connaught Catholic), A.J. (Joyce — Connaught), A.C. (Campbell maiden), L.Ga. (Garceau — French-Canadian).
  • Parallel 23andMe DNA Relatives Clustering anchored on the subject's own kit — would confirm whether the Schmitz/Freis and Arteau/Gerlach matches in D.E.'s Cluster 4 and Cluster 5 represent D.E.'s non-Donaghmoyne ancestral lines or have any presence in the subject's paternal clustering.
  • Y-DNA testing as a complementary path — Big Y-700 from male-line Hamill descendants would provide deeper paternal-line resolution beyond autosomal DNA's effective range
  • Re-evaluate adding E. to the reconstruction only if specific paternal coverage gaps are identified that her DNA could fill
  • Triangulate the Cumiskey hypothesis — whether P.H.'s undocumented paternal grandfather connects to J.K.'s Anderson Cumiskey ancestry

Communication Priorities

  • ★ M.S. tree manager outreach via Ancestry — request primary source(s) underlying the "James Hamill *" DNA-confirmed marker as Susan Hamill's father in M.S.'s tree. This is the highest-stakes communication priority for the four-couples sibling hypothesis test (above).
  • C.S. (Cory Stowell) outreach — request any Trainor-Hamill family documentation, Michigan emigration records, Mary Hamill's parental information
  • L.K. and E.McG. outreach — McGue family records; specifically any documentation of P. McGue McGeough (1800)'s parents and siblings
  • Continue outreach to Irish-resident matches — P.H. (Dundalk), E.F. (Ireland), C.D. (Ireland) — for parish-record access not easily obtained from outside Ireland
  • Re-attempt outreach to closed contacts at appropriate intervals; document all attempts in research log per BCG exhaustive-search standard
  • Investigate cluster matches with pending pedigrees — A.D., J.T.Y., M.B., M.M. (Maureen McCain, 23 cM Ancestry shared match with E.McG. in "Ireland Scotland ENWE" group) — to determine their documented connections to the Donaghmoyne population
  • Coordinate with cousin researchers — JGS (James Hamill of Dian line) and others for shared documentary research efforts